RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CYP19A1P11511 503 aaPredicted RBP29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 CRKLP46109 303 aaKnown RBP29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 KRT24Q2M2I5 525 aa29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 MBIPQ9NS73 344 aa29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 TFCP2L1Q9NZI6 479 aa29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 PNPLA7Q6ZV29 1317 aa29.08■■■□□ 2.25
SYNGR3-202ENST00000562045 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
SYNGR3-202ENST00000562045 USP16Q9Y5T5 823 aa29.07■■■□□ 2.24
SYNGR3-202ENST00000562045 INTS5Q6P9B9 1019 aaKnown RBP29.06■■■□□ 2.24
SYNGR3-202ENST00000562045 AK7Q96M32 723 aa29.06■■■□□ 2.24
SYNGR3-202ENST00000562045 IFT57Q9NWB7 429 aa29.06■■■□□ 2.24
SYNGR3-202ENST00000562045 CNTNAP4Q9C0A0 1308 aa29.05■■■□□ 2.24
SYNGR3-202ENST00000562045 GNPATO15228 680 aa29.05■■■□□ 2.24
SYNGR3-202ENST00000562045 LAMB4A4D0S4 1761 aa29.05■■■□□ 2.24
SYNGR3-202ENST00000562045 SRCAPQ6ZRS2 3230 aa29.04■■■□□ 2.24
SYNGR3-202ENST00000562045 GIGYF1O75420 1035 aaPredicted RBP29.03■■■□□ 2.24
SYNGR3-202ENST00000562045 SNRPA1P09661 255 aaKnown RBP29.03■■■□□ 2.24
SYNGR3-202ENST00000562045 PHF14O94880 888 aa29.03■■■□□ 2.24
SYNGR3-202ENST00000562045 RC3H1Q5TC82 1133 aaKnown RBP29.03■■■□□ 2.24
SYNGR3-202ENST00000562045 TSR2Q969E8 191 aaKnown RBP29.03■■■□□ 2.24
SYNGR3-202ENST00000562045 GNAI1P63096 354 aa29.02■■■□□ 2.24
SYNGR3-202ENST00000562045 ZBTB1Q9Y2K1 713 aa29.02■■■□□ 2.24
SYNGR3-202ENST00000562045 COL23A1Q86Y22 540 aaPredicted RBP29.01■■■□□ 2.23
SYNGR3-202ENST00000562045 CCDC87Q9NVE4 849 aa29.01■■■□□ 2.23
SYNGR3-202ENST00000562045 A1BGP04217 495 aa29■■■□□ 2.23
SYNGR3-202ENST00000562045 PIP4K2AP48426 406 aaPredicted RBP29■■■□□ 2.23
SYNGR3-202ENST00000562045 FANCIQ9NVI1 1328 aa29■■■□□ 2.23
SYNGR3-202ENST00000562045 C4AP0C0L4 1744 aa28.99■■■□□ 2.23
SYNGR3-202ENST00000562045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.99■■■□□ 2.23
SYNGR3-202ENST00000562045 RCAN3Q9UKA8 241 aa28.99■■■□□ 2.23
SYNGR3-202ENST00000562045 TEX13AQ9BXU3 409 aaPredicted RBP28.98■■■□□ 2.23
SYNGR3-202ENST00000562045 RPS6KA4O75676 772 aa28.97■■■□□ 2.23
SYNGR3-202ENST00000562045 STARD3NLO95772 234 aa28.97■■■□□ 2.23
SYNGR3-202ENST00000562045 SUPT16HQ9Y5B9 1047 aaKnown RBP28.97■■■□□ 2.23
SYNGR3-202ENST00000562045 CANXP27824 592 aaKnown RBP28.97■■■□□ 2.23
SYNGR3-202ENST00000562045 RTCBQ9Y3I0 505 aaKnown RBP28.96■■■□□ 2.23
SYNGR3-202ENST00000562045 HMGB2P26583 209 aaKnown RBP28.95■■■□□ 2.23
SYNGR3-202ENST00000562045 SSFA2P28290 1259 aa28.95■■■□□ 2.23
SYNGR3-202ENST00000562045 SOS1Q07889 1333 aaPredicted RBP28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 NBPF26B4DH59 902 aa28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 ZBTB7AO95365 584 aa28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 NBPF10Q6P3W6 841 aaKnown RBP28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 NBPF15Q8N660 670 aa28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 C8orf58Q8NAV2 365 aa28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 ARHGEF1Q92888 912 aaKnown RBP28.94■■■□□ 2.22
SYNGR3-202ENST00000562045 ELL2O00472 640 aaPredicted RBP28.93■■■□□ 2.22
SYNGR3-202ENST00000562045 MSH5O43196 834 aa28.93■■■□□ 2.22
SYNGR3-202ENST00000562045 TSPYL6Q8N831 410 aa28.91■■■□□ 2.22
SYNGR3-202ENST00000562045 NECTIN2Q92692 538 aa28.91■■■□□ 2.22
SYNGR3-202ENST00000562045 CT47B1P0C2W7 299 aaPredicted RBP28.91■■■□□ 2.22
SYNGR3-202ENST00000562045 EIF2S2P20042 333 aaKnown RBP28.91■■■□□ 2.22
SYNGR3-202ENST00000562045 TRAPPC3LQ5T215 181 aa28.91■■■□□ 2.22
SYNGR3-202ENST00000562045 EIF5P55010 431 aaKnown RBP28.9■■■□□ 2.22
SYNGR3-202ENST00000562045 COL15A1P39059 1388 aa28.9■■■□□ 2.22
SYNGR3-202ENST00000562045 EXOSC9Q06265 439 aaKnown RBP28.89■■■□□ 2.21
SYNGR3-202ENST00000562045 FLAD1Q8NFF5 587 aa28.89■■■□□ 2.21
SYNGR3-202ENST00000562045 ATF5Q9Y2D1 282 aaPredicted RBP28.89■■■□□ 2.21
SYNGR3-202ENST00000562045 ZNF330Q9Y3S2 320 aaPredicted RBP28.89■■■□□ 2.21
SYNGR3-202ENST00000562045 SRP68Q9UHB9 627 aaKnown RBP28.88■■■□□ 2.21
SYNGR3-202ENST00000562045 COL24A1Q17RW2 1714 aa28.87■■■□□ 2.21
SYNGR3-202ENST00000562045 NEFLP07196 543 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 PDIA6Q15084 440 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 MSL1Q68DK7 614 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 RNF123Q5XPI4 1314 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 ANXA1P04083 346 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 ADRA2BP18089 450 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 IL6STP40189 918 aaPredicted RBP28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 PROSER3Q2NL68 480 aa28.86■■■□□ 2.21
SYNGR3-202ENST00000562045 MYL6BP14649 208 aa28.84■■■□□ 2.21
SYNGR3-202ENST00000562045 RFC4P35249 363 aa28.84■■■□□ 2.21
SYNGR3-202ENST00000562045 MTFR1LQ9H019 292 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 GTF3C3Q9Y5Q9 886 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 USP42Q9H9J4 1324 aaKnown RBP28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 HOXB7P09629 217 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 HDGFL1Q5TGJ6 251 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 LRP10Q7Z4F1 713 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 TBC1D2BQ9UPU7 963 aa28.83■■■□□ 2.21
SYNGR3-202ENST00000562045 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
SYNGR3-202ENST00000562045 GYS1P13807 737 aa28.81■■■□□ 2.2
SYNGR3-202ENST00000562045 PTGER2P43116 358 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 USPL1Q5W0Q7 1092 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 SGIP1Q9BQI5 828 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 CHPF2Q9P2E5 772 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 SCN7AQ01118 1682 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 BCORQ6W2J9 1755 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 RRP1P56182 461 aaKnown RBP28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 TWISTNBQ3B726 338 aaPredicted RBP28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 BCL2L12Q9HB09 334 aa28.8■■■□□ 2.2
SYNGR3-202ENST00000562045 ZNF428Q96B54 188 aa28.79■■■□□ 2.2
SYNGR3-202ENST00000562045 NARFQ9UHQ1 456 aa28.79■■■□□ 2.2
SYNGR3-202ENST00000562045 LRP5O75197 1615 aa28.78■■■□□ 2.2
SYNGR3-202ENST00000562045 RARSP54136 660 aaKnown RBP28.78■■■□□ 2.2
SYNGR3-202ENST00000562045 ARXQ96QS3 562 aa28.78■■■□□ 2.2
SYNGR3-202ENST00000562045 SPON1Q9HCB6 807 aa28.78■■■□□ 2.2
SYNGR3-202ENST00000562045 ERBB4Q15303 1308 aa28.78■■■□□ 2.2
SYNGR3-202ENST00000562045 TCERG1O14776 1098 aaKnown RBP28.77■■■□□ 2.2
SYNGR3-202ENST00000562045 FKBP8Q14318 412 aa28.77■■■□□ 2.2
SYNGR3-202ENST00000562045 TTLL7Q6ZT98 887 aa28.77■■■□□ 2.2
SYNGR3-202ENST00000562045 DZIP3Q86Y13 1208 aaKnown RBP28.77■■■□□ 2.2
SYNGR3-202ENST00000562045 VAMP4O75379 141 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms