RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 KRT24Q2M2I5 525 aa15.77■□□□□ 0.12
AC009065.7-201ENST00000561544 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
AC009065.7-201ENST00000561544 MBIPQ9NS73 344 aa15.77■□□□□ 0.12
AC009065.7-201ENST00000561544 MSH5O43196 834 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 SSFA2P28290 1259 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 USP16Q9Y5T5 823 aa15.76■□□□□ 0.11
AC009065.7-201ENST00000561544 SOS1Q07889 1333 aaPredicted RBP15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 RTCBQ9Y3I0 505 aaKnown RBP15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 COL15A1P39059 1388 aa15.75■□□□□ 0.11
AC009065.7-201ENST00000561544 GIGYF1O75420 1035 aaPredicted RBP15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 STARD3NLO95772 234 aa15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 A1BGP04217 495 aa15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 GNAI1P63096 354 aa15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
AC009065.7-201ENST00000561544 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
AC009065.7-201ENST00000561544 MSL1Q68DK7 614 aa15.73■□□□□ 0.11
AC009065.7-201ENST00000561544 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
AC009065.7-201ENST00000561544 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
AC009065.7-201ENST00000561544 IL16Q14005 1332 aa15.72■□□□□ 0.11
AC009065.7-201ENST00000561544 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
AC009065.7-201ENST00000561544 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
AC009065.7-201ENST00000561544 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
AC009065.7-201ENST00000561544 ARHGEF1Q92888 912 aaKnown RBP15.71■□□□□ 0.11
AC009065.7-201ENST00000561544 MTFR1LQ9H019 292 aa15.71■□□□□ 0.11
AC009065.7-201ENST00000561544 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
AC009065.7-201ENST00000561544 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
AC009065.7-201ENST00000561544 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 ADRA2BP18089 450 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 PTGER2P43116 358 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 NBPF10Q6P3W6 841 aaKnown RBP15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 NGEFQ8N5V2 710 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 NBPF15Q8N660 670 aa15.7■□□□□ 0.1
AC009065.7-201ENST00000561544 USP42Q9H9J4 1324 aaKnown RBP15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 NUP98P52948 1817 aa15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 SLC16A10Q8TF71 515 aa15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 SGIP1Q9BQI5 828 aa15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
AC009065.7-201ENST00000561544 AFDNP55196 1824 aaKnown RBP15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 ANKRD36CQ5JPF3 1778 aa15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 EIF2S2P20042 333 aaKnown RBP15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 RFC4P35249 363 aa15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
AC009065.7-201ENST00000561544 ELL2O00472 640 aaPredicted RBP15.67■□□□□ 0.1
AC009065.7-201ENST00000561544 GYS1P13807 737 aa15.67■□□□□ 0.1
AC009065.7-201ENST00000561544 IL6STP40189 918 aaPredicted RBP15.67■□□□□ 0.1
AC009065.7-201ENST00000561544 PROSER3Q2NL68 480 aa15.67■□□□□ 0.1
AC009065.7-201ENST00000561544 ARFGEF2Q9Y6D5 1785 aa15.67■□□□□ 0.1
AC009065.7-201ENST00000561544 ANXA1P04083 346 aa15.66■□□□□ 0.1
AC009065.7-201ENST00000561544 MYL6BP14649 208 aa15.66■□□□□ 0.1
AC009065.7-201ENST00000561544 TSPYL6Q8N831 410 aa15.66■□□□□ 0.1
AC009065.7-201ENST00000561544 HOXB7P09629 217 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 HNRNPUQ00839 825 aaKnown RBP eCLIP15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 PDIA6Q15084 440 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 USPL1Q5W0Q7 1092 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 TBC1D2BQ9UPU7 963 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
AC009065.7-201ENST00000561544 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 FKBP8Q14318 412 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 CHPF2Q9P2E5 772 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
AC009065.7-201ENST00000561544 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 ZPR1O75312 459 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 ARXQ96QS3 562 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
AC009065.7-201ENST00000561544 CACNA1FO60840 1977 aa15.62■□□□□ 0.09
AC009065.7-201ENST00000561544 A0A087WZG4 1122 aa15.62■□□□□ 0.09
AC009065.7-201ENST00000561544 POLD1P28340 1107 aa15.62■□□□□ 0.09
AC009065.7-201ENST00000561544 EXOSC9Q06265 439 aaKnown RBP15.62■□□□□ 0.09
AC009065.7-201ENST00000561544 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
AC009065.7-201ENST00000561544 MMP10P09238 476 aa15.61■□□□□ 0.09
AC009065.7-201ENST00000561544 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
AC009065.7-201ENST00000561544 PPP1R1BQ9UD71 204 aaPredicted RBP15.61■□□□□ 0.09
AC009065.7-201ENST00000561544 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
AC009065.7-201ENST00000561544 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 TCERG1O14776 1098 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms