RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	SRCAP	Q6ZRS2	3230 aa		33.73	■■■□□ 2.99
TCF12-222	ENST00000561152	POLD1	P28340	1107 aa		33.72	■■■□□ 2.99
TCF12-222	ENST00000561152	PTGER2	P43116	358 aa		33.72	■■■□□ 2.99
TCF12-222	ENST00000561152	SMIM5	Q71RC9	77 aa		33.72	■■■□□ 2.99
TCF12-222	ENST00000561152	FAM9B	Q8IZU0	186 aa		33.72	■■■□□ 2.99
TCF12-222	ENST00000561152	COL24A1	Q17RW2	1714 aa		33.72	■■■□□ 2.99
TCF12-222	ENST00000561152	CALD1	Q05682	793 aa	Known RBP	33.71	■■■□□ 2.99
TCF12-222	ENST00000561152	RFC4	P35249	363 aa		33.7	■■■□□ 2.99
TCF12-222	ENST00000561152	CCER2	I3L3R5	266 aa		33.69	■■■□□ 2.98
TCF12-222	ENST00000561152	ARHGEF1	Q92888	912 aa	Known RBP	33.69	■■■□□ 2.98
TCF12-222	ENST00000561152	SGIP1	Q9BQI5	828 aa		33.69	■■■□□ 2.98
TCF12-222	ENST00000561152	ZBTB1	Q9Y2K1	713 aa		33.69	■■■□□ 2.98
TCF12-222	ENST00000561152	EIF4A1	P60842	406 aa	Known RBP	33.68	■■■□□ 2.98
TCF12-222	ENST00000561152	NCBP3	Q53F19	620 aa	Known RBP	33.67	■■■□□ 2.98
TCF12-222	ENST00000561152	SOS1	Q07889	1333 aa	Predicted RBP	33.67	■■■□□ 2.98
TCF12-222	ENST00000561152	C4A	P0C0L4	1744 aa		33.66	■■■□□ 2.98
TCF12-222	ENST00000561152	LAS1L	Q9Y4W2	734 aa	Known RBP	33.66	■■■□□ 2.98
TCF12-222	ENST00000561152	CANX	P27824	592 aa	Known RBP	33.65	■■■□□ 2.98
TCF12-222	ENST00000561152	USP16	Q9Y5T5	823 aa		33.65	■■■□□ 2.98
TCF12-222	ENST00000561152	LAMB4	A4D0S4	1761 aa		33.65	■■■□□ 2.98
TCF12-222	ENST00000561152	CHL1	O00533	1208 aa		33.64	■■■□□ 2.98
TCF12-222	ENST00000561152	CCDC27	Q2M243	656 aa		33.64	■■■□□ 2.98
TCF12-222	ENST00000561152	MSL1	Q68DK7	614 aa		33.64	■■■□□ 2.98
TCF12-222	ENST00000561152	COL15A1	P39059	1388 aa		33.63	■■■□□ 2.97
TCF12-222	ENST00000561152	NPM2	Q86SE8	214 aa	Known RBP	33.63	■■■□□ 2.97
TCF12-222	ENST00000561152	CFAP44	Q96MT7	982 aa		33.63	■■■□□ 2.97
TCF12-222	ENST00000561152	ARX	Q96QS3	562 aa		33.63	■■■□□ 2.97
TCF12-222	ENST00000561152	GIGYF1	O75420	1035 aa	Predicted RBP	33.62	■■■□□ 2.97
TCF12-222	ENST00000561152		A0A087WZG4	1122 aa		33.61	■■■□□ 2.97
TCF12-222	ENST00000561152	PRAMEF22	A3QJZ6	481 aa		33.61	■■■□□ 2.97
TCF12-222	ENST00000561152	IL6ST	P40189	918 aa	Predicted RBP	33.61	■■■□□ 2.97
TCF12-222	ENST00000561152	A1BG	P04217	495 aa		33.6	■■■□□ 2.97
TCF12-222	ENST00000561152	NLGN1	Q8N2Q7	840 aa		33.6	■■■□□ 2.97
TCF12-222	ENST00000561152	USP42	Q9H9J4	1324 aa	Known RBP	33.59	■■■□□ 2.97
TCF12-222	ENST00000561152	ZPR1	O75312	459 aa		33.59	■■■□□ 2.97
TCF12-222	ENST00000561152	EIF5	P55010	431 aa	Known RBP	33.59	■■■□□ 2.97
TCF12-222	ENST00000561152	GNAI1	P63096	354 aa		33.59	■■■□□ 2.97
TCF12-222	ENST00000561152	IFT57	Q9NWB7	429 aa		33.59	■■■□□ 2.97
TCF12-222	ENST00000561152	NGEF	Q8N5V2	710 aa		33.58	■■■□□ 2.97
TCF12-222	ENST00000561152	GYS1	P13807	737 aa		33.57	■■■□□ 2.96
TCF12-222	ENST00000561152	WWC1	Q8IX03	1113 aa		33.56	■■■□□ 2.96
TCF12-222	ENST00000561152	NARF	Q9UHQ1	456 aa		33.56	■■■□□ 2.96
TCF12-222	ENST00000561152	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.56	■■■□□ 2.96
TCF12-222	ENST00000561152	ZNF853	P0CG23	659 aa		33.54	■■■□□ 2.96
TCF12-222	ENST00000561152	SRP68	Q9UHB9	627 aa	Known RBP	33.54	■■■□□ 2.96
TCF12-222	ENST00000561152	SENP3-EIF4A1	A0A087X0R7	540 aa		33.52	■■■□□ 2.96
TCF12-222	ENST00000561152	MBIP	Q9NS73	344 aa		33.52	■■■□□ 2.96
TCF12-222	ENST00000561152	USPL1	Q5W0Q7	1092 aa		33.51	■■■□□ 2.95
TCF12-222	ENST00000561152	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.5	■■■□□ 2.95
TCF12-222	ENST00000561152	ERBB4	Q15303	1308 aa		33.5	■■■□□ 2.95
TCF12-222	ENST00000561152	MMP10	P09238	476 aa		33.49	■■■□□ 2.95
TCF12-222	ENST00000561152	IL16	Q14005	1332 aa		33.49	■■■□□ 2.95
TCF12-222	ENST00000561152	HOXB7	P09629	217 aa		33.48	■■■□□ 2.95
TCF12-222	ENST00000561152	PIP4K2A	P48426	406 aa	Predicted RBP	33.48	■■■□□ 2.95
TCF12-222	ENST00000561152	MIER1	Q8N108	512 aa		33.48	■■■□□ 2.95
TCF12-222	ENST00000561152	SALL2	Q9Y467	1007 aa	Predicted RBP	33.48	■■■□□ 2.95
TCF12-222	ENST00000561152	NBPF26	B4DH59	902 aa		33.47	■■■□□ 2.95
TCF12-222	ENST00000561152	NBPF10	Q6P3W6	841 aa	Known RBP	33.47	■■■□□ 2.95
TCF12-222	ENST00000561152	WDR63	Q8IWG1	891 aa		33.47	■■■□□ 2.95
TCF12-222	ENST00000561152	NBPF15	Q8N660	670 aa		33.47	■■■□□ 2.95
TCF12-222	ENST00000561152	FKBP8	Q14318	412 aa		33.46	■■■□□ 2.95
TCF12-222	ENST00000561152	DZIP3	Q86Y13	1208 aa	Known RBP	33.46	■■■□□ 2.95
TCF12-222	ENST00000561152	KLHL34	Q8N239	644 aa		33.46	■■■□□ 2.95
TCF12-222	ENST00000561152	SCN7A	Q01118	1682 aa		33.45	■■■□□ 2.95
TCF12-222	ENST00000561152	EIF2S2	P20042	333 aa	Known RBP	33.45	■■■□□ 2.95
TCF12-222	ENST00000561152	SYT17	Q9BSW7	474 aa		33.45	■■■□□ 2.95
TCF12-222	ENST00000561152	TBC1D2B	Q9UPU7	963 aa		33.45	■■■□□ 2.95
TCF12-222	ENST00000561152	PARP3	Q9Y6F1	533 aa		33.45	■■■□□ 2.95
TCF12-222	ENST00000561152	KRT24	Q2M2I5	525 aa		33.42	■■■□□ 2.94
TCF12-222	ENST00000561152	BCL2L12	Q9HB09	334 aa		33.41	■■■□□ 2.94
TCF12-222	ENST00000561152	CD2AP	Q9Y5K6	639 aa		33.41	■■■□□ 2.94
TCF12-222	ENST00000561152	BCOR	Q6W2J9	1755 aa		33.41	■■■□□ 2.94
TCF12-222	ENST00000561152	MYL6B	P14649	208 aa		33.4	■■■□□ 2.94
TCF12-222	ENST00000561152	DUSP27	Q5VZP5	1158 aa		33.4	■■■□□ 2.94
TCF12-222	ENST00000561152	CAMTA2	O94983	1202 aa		33.39	■■■□□ 2.94
TCF12-222	ENST00000561152	TM4SF1	P30408	202 aa		33.39	■■■□□ 2.94
TCF12-222	ENST00000561152	CHMP4A	Q9BY43	222 aa		33.39	■■■□□ 2.94
TCF12-222	ENST00000561152	ZNF652	Q9Y2D9	606 aa		33.39	■■■□□ 2.94
TCF12-222	ENST00000561152	RGL2	O15211	777 aa		33.38	■■■□□ 2.93
TCF12-222	ENST00000561152	HDGFL1	Q5TGJ6	251 aa		33.38	■■■□□ 2.93
TCF12-222	ENST00000561152	NFIX	Q14938	502 aa		33.36	■■■□□ 2.93
TCF12-222	ENST00000561152	CLEC4G	Q6UXB4	293 aa		33.36	■■■□□ 2.93
TCF12-222	ENST00000561152	TSR2	Q969E8	191 aa	Known RBP	33.36	■■■□□ 2.93
TCF12-222	ENST00000561152	KIF6	Q6ZMV9	814 aa		33.35	■■■□□ 2.93
TCF12-222	ENST00000561152	NECTIN2	Q92692	538 aa		33.35	■■■□□ 2.93
TCF12-222	ENST00000561152	DCAF8L1	A6NGE4	600 aa		33.34	■■■□□ 2.93
TCF12-222	ENST00000561152	POLRMT	O00411	1230 aa	Known RBP	33.34	■■■□□ 2.93
TCF12-222	ENST00000561152	DDR1	Q08345	913 aa		33.34	■■■□□ 2.93
TCF12-222	ENST00000561152	PDIA6	Q15084	440 aa		33.34	■■■□□ 2.93
TCF12-222	ENST00000561152	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.34	■■■□□ 2.93
TCF12-222	ENST00000561152	MYH16	Q9H6N6	1097 aa		33.32	■■■□□ 2.92
TCF12-222	ENST00000561152	DBF4	Q9UBU7	674 aa	Predicted RBP	33.32	■■■□□ 2.92
TCF12-222	ENST00000561152	ERVV-1	B6SEH8	477 aa		33.31	■■■□□ 2.92
TCF12-222	ENST00000561152	ELL2	O00472	640 aa	Predicted RBP	33.31	■■■□□ 2.92
TCF12-222	ENST00000561152	TBC1D9B	Q66K14	1250 aa		33.31	■■■□□ 2.92
TCF12-222	ENST00000561152	BICDL1	Q6ZP65	573 aa		33.31	■■■□□ 2.92
TCF12-222	ENST00000561152	C8orf58	Q8NAV2	365 aa		33.31	■■■□□ 2.92
TCF12-222	ENST00000561152	MAP3K15	Q6ZN16	1313 aa		33.3	■■■□□ 2.92
TCF12-222	ENST00000561152	FANCI	Q9NVI1	1328 aa		33.3	■■■□□ 2.92
TCF12-222	ENST00000561152	KIF13B	Q9NQT8	1826 aa		33.3	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms