RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-220ENST00000560998 RBSNQ9H1K0 784 aa16.98■□□□□ 0.31
RABGGTA-220ENST00000560998 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-220ENST00000560998 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 HMMRO75330 724 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
RABGGTA-220ENST00000560998 MST1RQ04912 1400 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 CDC45O75419 566 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 GNAI2P04899 355 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 CYP2E1P05181 493 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 TAF3Q5VWG9 929 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.31
RABGGTA-220ENST00000560998 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 LRSAM1Q6UWE0 723 aa16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-220ENST00000560998 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
RABGGTA-220ENST00000560998 GNAI3P08754 354 aa16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 RABEP1Q15276 862 aa16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 CD2BP2O95400 341 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 HOXB7P09629 217 aa16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 PRIM1P49642 420 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 PXDNQ92626 1479 aa16.93■□□□□ 0.3
RABGGTA-220ENST00000560998 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
RABGGTA-220ENST00000560998 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
RABGGTA-220ENST00000560998 APBB1O00213 710 aa16.91■□□□□ 0.3
RABGGTA-220ENST00000560998 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
RABGGTA-220ENST00000560998 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
RABGGTA-220ENST00000560998 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
RABGGTA-220ENST00000560998 TEFQ10587 303 aa16.91■□□□□ 0.3
RABGGTA-220ENST00000560998 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 KCNQ3O43525 872 aa16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 MBD3O95983 291 aa16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
RABGGTA-220ENST00000560998 BTBD11A6QL63 1104 aa16.89■□□□□ 0.3
RABGGTA-220ENST00000560998 ATP8B2P98198 1209 aa16.89■□□□□ 0.3
RABGGTA-220ENST00000560998 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.3
RABGGTA-220ENST00000560998 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.29
RABGGTA-220ENST00000560998 USP44Q9H0E7 712 aa16.89■□□□□ 0.29
RABGGTA-220ENST00000560998 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
RABGGTA-220ENST00000560998 DCCP43146 1447 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 ATF3P18847 181 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 SDSP20132 328 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 PDE4CQ08493 712 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-220ENST00000560998 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
RABGGTA-220ENST00000560998 PNMA6EA0A0J9YXQ4 647 aa16.87■□□□□ 0.29
RABGGTA-220ENST00000560998 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
RABGGTA-220ENST00000560998 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
RABGGTA-220ENST00000560998 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 ERBB3P21860 1342 aa16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 ZNF710Q8N1W2 664 aa16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 ARID3AQ99856 593 aa16.86■□□□□ 0.29
RABGGTA-220ENST00000560998 PDE1AP54750 535 aa16.85■□□□□ 0.29
RABGGTA-220ENST00000560998 ZC3H6P61129 1189 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-220ENST00000560998 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
RABGGTA-220ENST00000560998 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
RABGGTA-220ENST00000560998 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 KIF3AQ9Y496 699 aa16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 COL18A1P39060 1754 aa16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 HEG1Q9ULI3 1381 aa16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 DNTTIP2Q5QJE6 756 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 SYAP1Q96A49 352 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-220ENST00000560998 CRYBG1Q9Y4K1 1723 aa16.83■□□□□ 0.29
RABGGTA-220ENST00000560998 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-220ENST00000560998 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
RABGGTA-220ENST00000560998 CASC1Q6TDU7 716 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms