RNA–Protein interactions for RNA: ENST00000560566.5

CLU-217, Transcript of clusterin, humanhuman

TSL 4

Gene CLU, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-217ENST00000560566 TJP1Q07157 1748 aa17.58■□□□□ 0.41
CLU-217ENST00000560566 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
CLU-217ENST00000560566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
CLU-217ENST00000560566 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
CLU-217ENST00000560566 PDGFDQ9GZP0 370 aaPredicted RBP17.58■□□□□ 0.4
CLU-217ENST00000560566 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
CLU-217ENST00000560566 TRAPPC3LQ5T215 181 aa17.57■□□□□ 0.4
CLU-217ENST00000560566 AMIGO3Q86WK7 504 aa17.57■□□□□ 0.4
CLU-217ENST00000560566 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
CLU-217ENST00000560566 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
CLU-217ENST00000560566 KDM3BQ7LBC6 1761 aa17.57■□□□□ 0.4
CLU-217ENST00000560566 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
CLU-217ENST00000560566 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
CLU-217ENST00000560566 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
CLU-217ENST00000560566 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
CLU-217ENST00000560566 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
CLU-217ENST00000560566 PHF14O94880 888 aa17.55■□□□□ 0.4
CLU-217ENST00000560566 MTFR1LQ9H019 292 aa17.55■□□□□ 0.4
CLU-217ENST00000560566 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
CLU-217ENST00000560566 A1BGP04217 495 aa17.54■□□□□ 0.4
CLU-217ENST00000560566 HOXB7P09629 217 aa17.54■□□□□ 0.4
CLU-217ENST00000560566 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
CLU-217ENST00000560566 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
CLU-217ENST00000560566 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
CLU-217ENST00000560566 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
CLU-217ENST00000560566 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
CLU-217ENST00000560566 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
CLU-217ENST00000560566 SPON1Q9HCB6 807 aa17.53■□□□□ 0.4
CLU-217ENST00000560566 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
CLU-217ENST00000560566 RFC4P35249 363 aa17.52■□□□□ 0.4
CLU-217ENST00000560566 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.39
CLU-217ENST00000560566 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
CLU-217ENST00000560566 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
CLU-217ENST00000560566 A0A087WZG4 1122 aa17.5■□□□□ 0.39
CLU-217ENST00000560566 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
CLU-217ENST00000560566 DUSP27Q5VZP5 1158 aa17.5■□□□□ 0.39
CLU-217ENST00000560566 COL15A1P39059 1388 aa17.5■□□□□ 0.39
CLU-217ENST00000560566 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
CLU-217ENST00000560566 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
CLU-217ENST00000560566 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
CLU-217ENST00000560566 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
CLU-217ENST00000560566 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
CLU-217ENST00000560566 TSR2Q969E8 191 aaKnown RBP17.49■□□□□ 0.39
CLU-217ENST00000560566 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
CLU-217ENST00000560566 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
CLU-217ENST00000560566 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
CLU-217ENST00000560566 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
CLU-217ENST00000560566 PTGER2P43116 358 aa17.48■□□□□ 0.39
CLU-217ENST00000560566 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
CLU-217ENST00000560566 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
CLU-217ENST00000560566 SGIP1Q9BQI5 828 aa17.48■□□□□ 0.39
CLU-217ENST00000560566 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
CLU-217ENST00000560566 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
CLU-217ENST00000560566 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
CLU-217ENST00000560566 ZPR1O75312 459 aa17.47■□□□□ 0.39
CLU-217ENST00000560566 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
CLU-217ENST00000560566 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
CLU-217ENST00000560566 E9PSI1 815 aa17.46■□□□□ 0.39
CLU-217ENST00000560566 GYS1P13807 737 aa17.46■□□□□ 0.39
CLU-217ENST00000560566 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
CLU-217ENST00000560566 PDIA6Q15084 440 aa17.46■□□□□ 0.39
CLU-217ENST00000560566 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
CLU-217ENST00000560566 RGL2O15211 777 aa17.45■□□□□ 0.38
CLU-217ENST00000560566 POLD1P28340 1107 aa17.45■□□□□ 0.38
CLU-217ENST00000560566 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLU-217ENST00000560566 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
CLU-217ENST00000560566 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
CLU-217ENST00000560566 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
CLU-217ENST00000560566 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
CLU-217ENST00000560566 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
CLU-217ENST00000560566 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
CLU-217ENST00000560566 LRP10Q7Z4F1 713 aa17.44■□□□□ 0.38
CLU-217ENST00000560566 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
CLU-217ENST00000560566 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
CLU-217ENST00000560566 LRP5O75197 1615 aa17.43■□□□□ 0.38
CLU-217ENST00000560566 MYL6BP14649 208 aa17.43■□□□□ 0.38
CLU-217ENST00000560566 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
CLU-217ENST00000560566 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
CLU-217ENST00000560566 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
CLU-217ENST00000560566 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
CLU-217ENST00000560566 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
CLU-217ENST00000560566 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
CLU-217ENST00000560566 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
CLU-217ENST00000560566 FKBP8Q14318 412 aa17.42■□□□□ 0.38
CLU-217ENST00000560566 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
CLU-217ENST00000560566 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CLU-217ENST00000560566 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
CLU-217ENST00000560566 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
CLU-217ENST00000560566 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
CLU-217ENST00000560566 ARXQ96QS3 562 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
CLU-217ENST00000560566 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
CLU-217ENST00000560566 VAMP4O75379 141 aa17.4■□□□□ 0.38
CLU-217ENST00000560566 TM4SF1P30408 202 aa17.4■□□□□ 0.38
CLU-217ENST00000560566 PPP1R1BQ9UD71 204 aaPredicted RBP17.4■□□□□ 0.38
CLU-217ENST00000560566 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms