RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 ZNF772Q68DY9 489 aaPredicted RBP9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 TMOD3Q9NYL9 352 aa9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 PAPPAQ13219 1627 aa9.27□□□□□ -0.92
HMBOX1-214ENST00000560357 A0A0G2JS52 829 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 MYT1Q01538 1121 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 CCDC30Q5VVM6 783 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 ZKSCAN2Q63HK3 967 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 TTC5Q8N0Z6 440 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 TNNQ9UQP3 1299 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 BCL9O00512 1426 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 DOT1LQ8TEK3 1739 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.93
HMBOX1-214ENST00000560357 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 PRAMEF22A3QJZ6 481 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 CANXP27824 592 aaKnown RBP9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 ATF7IPQ6VMQ6 1270 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 ARHGAP45Q92619 1136 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 CRBNQ96SW2 442 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 CHMP4AQ9BY43 222 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
HMBOX1-214ENST00000560357 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 RLBP1P12271 317 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 TRIM27P14373 513 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 EIF2S2P20042 333 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 RBM6P78332 1123 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 G2E3Q7L622 706 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 PANK1Q8TE04 598 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 STK31Q9BXU1 1019 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 C5P01031 1676 aa9.25□□□□□ -0.93
HMBOX1-214ENST00000560357 KCNQ2O43526 872 aa9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 MS4A1P11836 297 aa9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 DZIP1LQ8IYY4 767 aaKnown RBP9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 SYTL4Q96C24 671 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
HMBOX1-214ENST00000560357 FAM182BQ5T319 152 aa9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 CLUAP1Q96AJ1 413 aa9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 API5Q9BZZ5 524 aaKnown RBP9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 DBF4Q9UBU7 674 aaPredicted RBP9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 BRWD3Q6RI45 1802 aa9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 PTPRCP08575 1304 aa9.23□□□□□ -0.93
HMBOX1-214ENST00000560357 RXRBP28702 533 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 FLIIQ13045 1269 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 PDIA6Q15084 440 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 FTSJ3Q8IY81 847 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 PPP4R2Q9NY27 417 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 ABCC4O15439 1325 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 LAMB4A4D0S4 1761 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 RGS12O14924 1447 aa9.22□□□□□ -0.93
HMBOX1-214ENST00000560357 ANXA1P04083 346 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 PROSER3Q2NL68 480 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 PTF1AQ7RTS3 328 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 HYPKQ9NX55 129 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 SBF2Q86WG5 1849 aa9.21□□□□□ -0.94
HMBOX1-214ENST00000560357 NHSQ6T4R5 1651 aa9.2□□□□□ -0.94
HMBOX1-214ENST00000560357 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
HMBOX1-214ENST00000560357 DNAJC10Q8IXB1 793 aa9.2□□□□□ -0.94
HMBOX1-214ENST00000560357 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-214ENST00000560357 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
HMBOX1-214ENST00000560357 BTAF1O14981 1849 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 F6X3S4 739 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 A1BGP04217 495 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 FKBP5Q13451 457 aaPredicted RBP9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 INTS3Q68E01 1043 aaKnown RBP9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 NBPF10Q6P3W6 841 aaKnown RBP9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 FAM196AQ6ZSG2 479 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
HMBOX1-214ENST00000560357 NBPF15Q8N660 670 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms