RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PRKAR2BP31323 418 aa27.54■■■□□ 2
TSPAN3-206ENST00000559373 GPBP1L1Q9HC44 474 aaPredicted RBP27.54■■■□□ 2
TSPAN3-206ENST00000559373 DLG5Q8TDM6 1919 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 CCDC88AQ3V6T2 1871 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 COL15A1P39059 1388 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 TEFQ10587 303 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 ARHGAP27Q6ZUM4 889 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 TTC5Q8N0Z6 440 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 SBF1O95248 1867 aa27.53■■■□□ 2
TSPAN3-206ENST00000559373 PPP2R1AP30153 589 aa27.52■■■□□ 2
TSPAN3-206ENST00000559373 GAS2L2Q8NHY3 880 aa27.52■■■□□ 2
TSPAN3-206ENST00000559373 CFAP53Q96M91 514 aa27.52■■■□□ 2
TSPAN3-206ENST00000559373 POLRMTO00411 1230 aaKnown RBP27.51■■□□□ 1.99
TSPAN3-206ENST00000559373 TM4SF1P30408 202 aa27.51■■□□□ 1.99
TSPAN3-206ENST00000559373 CHRNA5P30532 468 aa27.51■■□□□ 1.99
TSPAN3-206ENST00000559373 ZNF496Q96IT1 587 aaPredicted RBP27.51■■□□□ 1.99
TSPAN3-206ENST00000559373 RSPH6AQ9H0K4 717 aa27.51■■□□□ 1.99
TSPAN3-206ENST00000559373 KCNQ3O43525 872 aa27.49■■□□□ 1.99
TSPAN3-206ENST00000559373 NRXN2Q9P2S2 1712 aa27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 U2AF1L5P0DN76 240 aaPredicted RBP27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 U2AF1Q01081 240 aaKnown RBP eCLIP27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 NFIXQ14938 502 aa27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 ZNF790Q6PG37 636 aa27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 NARFQ9UHQ1 456 aa27.48■■□□□ 1.99
TSPAN3-206ENST00000559373 VSIG10Q8N0Z9 540 aa27.47■■□□□ 1.99
TSPAN3-206ENST00000559373 ZNF330Q9Y3S2 320 aaPredicted RBP27.47■■□□□ 1.99
TSPAN3-206ENST00000559373 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
TSPAN3-206ENST00000559373 CEP350Q5VT06 3117 aa27.46■■□□□ 1.99
TSPAN3-206ENST00000559373 BICDL1Q6ZP65 573 aa27.46■■□□□ 1.99
TSPAN3-206ENST00000559373 ANKRD31Q8N7Z5 1873 aa27.45■■□□□ 1.99
TSPAN3-206ENST00000559373 PIM2Q9P1W9 311 aa27.45■■□□□ 1.98
TSPAN3-206ENST00000559373 HEG1Q9ULI3 1381 aa27.45■■□□□ 1.98
TSPAN3-206ENST00000559373 DLEC1Q9Y238 1755 aa27.45■■□□□ 1.98
TSPAN3-206ENST00000559373 STARD3NLO95772 234 aa27.44■■□□□ 1.98
TSPAN3-206ENST00000559373 NUDCQ9Y266 331 aa27.44■■□□□ 1.98
TSPAN3-206ENST00000559373 MCM10Q7L590 875 aa27.43■■□□□ 1.98
TSPAN3-206ENST00000559373 SCN7AQ01118 1682 aa27.43■■□□□ 1.98
TSPAN3-206ENST00000559373 BTBD11A6QL63 1104 aa27.42■■□□□ 1.98
TSPAN3-206ENST00000559373 A1BGP04217 495 aa27.42■■□□□ 1.98
TSPAN3-206ENST00000559373 DCTN1Q14203 1278 aa27.42■■□□□ 1.98
TSPAN3-206ENST00000559373 CEMIPQ8WUJ3 1361 aa27.41■■□□□ 1.98
TSPAN3-206ENST00000559373 PIP4K2AP48426 406 aaPredicted RBP27.41■■□□□ 1.98
TSPAN3-206ENST00000559373 EIF5P55010 431 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-206ENST00000559373 DALRD3Q5D0E6 543 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-206ENST00000559373 TBC1D2BQ9UPU7 963 aa27.41■■□□□ 1.98
TSPAN3-206ENST00000559373 PRAMEF22A3QJZ6 481 aa27.4■■□□□ 1.98
TSPAN3-206ENST00000559373 SERPINB2P05120 415 aa27.4■■□□□ 1.98
TSPAN3-206ENST00000559373 FMNL2Q96PY5 1086 aa27.4■■□□□ 1.98
TSPAN3-206ENST00000559373 CARMIL3Q8ND23 1372 aa27.38■■□□□ 1.97
TSPAN3-206ENST00000559373 BCORQ6W2J9 1755 aa27.38■■□□□ 1.97
TSPAN3-206ENST00000559373 CCDC24Q8N4L8 307 aa27.38■■□□□ 1.97
TSPAN3-206ENST00000559373 C9orf131Q5VYM1 1079 aa27.37■■□□□ 1.97
TSPAN3-206ENST00000559373 TBC1D9BQ66K14 1250 aa27.37■■□□□ 1.97
TSPAN3-206ENST00000559373 KIF3CO14782 793 aa27.36■■□□□ 1.97
TSPAN3-206ENST00000559373 USP16Q9Y5T5 823 aa27.36■■□□□ 1.97
TSPAN3-206ENST00000559373 RTF1Q92541 710 aaKnown RBP27.35■■□□□ 1.97
TSPAN3-206ENST00000559373 TEX13AQ9BXU3 409 aaPredicted RBP27.35■■□□□ 1.97
TSPAN3-206ENST00000559373 COL11A2P13942 1736 aaPredicted RBP27.35■■□□□ 1.97
TSPAN3-206ENST00000559373 A0A087WZG4 1122 aa27.33■■□□□ 1.97
TSPAN3-206ENST00000559373 NMRK2Q9NPI5 230 aa27.33■■□□□ 1.97
TSPAN3-206ENST00000559373 MIS18AQ9NYP9 233 aa27.32■■□□□ 1.96
TSPAN3-206ENST00000559373 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
TSPAN3-206ENST00000559373 RASSF7Q02833 373 aa27.31■■□□□ 1.96
TSPAN3-206ENST00000559373 C2CD5Q86YS7 1000 aa27.31■■□□□ 1.96
TSPAN3-206ENST00000559373 RNF181Q9P0P0 153 aa27.31■■□□□ 1.96
TSPAN3-206ENST00000559373 KDM3BQ7LBC6 1761 aa27.28■■□□□ 1.96
TSPAN3-206ENST00000559373 NPM2Q86SE8 214 aaKnown RBP27.28■■□□□ 1.96
TSPAN3-206ENST00000559373 LAMB4A4D0S4 1761 aa27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 CAMTA2O94983 1202 aa27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 DZIP3Q86Y13 1208 aaKnown RBP27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 ZNF219Q9P2Y4 722 aaPredicted RBP27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 SLX4Q8IY92 1834 aa27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 TIAM2Q8IVF5 1701 aa27.27■■□□□ 1.96
TSPAN3-206ENST00000559373 H0YIN7 160 aa27.26■■□□□ 1.95
TSPAN3-206ENST00000559373 HSPA6P17066 643 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 PRELPP51888 382 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 PRR5LQ6MZQ0 368 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 TTLL6Q8N841 843 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 ZNF622Q969S3 477 aaKnown RBP eCLIP27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 THUMPD2Q9BTF0 503 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 DICER1Q9UPY3 1922 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 FER1L6Q2WGJ9 1857 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 NUP98P52948 1817 aa27.25■■□□□ 1.95
TSPAN3-206ENST00000559373 SNRPA1P09661 255 aaKnown RBP27.24■■□□□ 1.95
TSPAN3-206ENST00000559373 NPHP1O15259 732 aa27.23■■□□□ 1.95
TSPAN3-206ENST00000559373 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
TSPAN3-206ENST00000559373 SETDB2Q96T68 719 aa27.23■■□□□ 1.95
TSPAN3-206ENST00000559373 TNRC6CQ9HCJ0 1690 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 NBPF26B4DH59 902 aa27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 HTATSF1O43719 755 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 NBPF10Q6P3W6 841 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 NBPF15Q8N660 670 aa27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 PLEKHF1Q96S99 279 aa27.21■■□□□ 1.95
TSPAN3-206ENST00000559373 ARFGEF2Q9Y6D5 1785 aa27.2■■□□□ 1.95
TSPAN3-206ENST00000559373 NEFMP07197 916 aa27.2■■□□□ 1.94
TSPAN3-206ENST00000559373 RRAGCQ9HB90 399 aa27.2■■□□□ 1.94
TSPAN3-206ENST00000559373 CNBD1Q8NA66 436 aa27.19■■□□□ 1.94
TSPAN3-206ENST00000559373 BRIP1Q9BX63 1249 aa27.19■■□□□ 1.94
TSPAN3-206ENST00000559373 FAM177BA6PVY3 158 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms