RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 PRPF38AQ8NAV1 312 aaKnown RBP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZHX3Q9H4I2 956 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 RNF19AQ9NV58 838 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZBTB12Q9Y330 459 aaPredicted RBP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 MSH5O43196 834 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 MAPK1P28482 360 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 SCYL1Q96KG9 808 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 CHST12Q9NRB3 414 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 PCDHB8Q9UN66 801 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 PDZRN3Q9UPQ7 1066 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 PCDHB13Q9Y5F0 798 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 RGL3Q3MIN7 710 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 RPRD2Q5VT52 1461 aaKnown RBP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 ENOX1Q8TC92 643 aaKnown RBP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 SCP2P22307 547 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 HIC1Q14526 733 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 MFSD10Q14728 455 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 NBPF20Q3BBV1 942 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 PPP4R4Q6NUP7 873 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 CRISPLD2Q9H0B8 497 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 OSBPL2Q9H1P3 480 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 INTUQ9ULD6 942 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZNF746Q6NUN9 644 aaPredicted RBP7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 CACTIN-AS1Q8N1I8 211 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 THRAP3Q9Y2W1 955 aaKnown RBP7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 ERBINQ96RT1 1412 aa7.17□□□□□ -1.26
CTDSPL2-206ENST00000559175 ABCB7O75027 752 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 RRM1P23921 792 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 COPB2P35606 906 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 AMPD3Q01432 767 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 FAM161AQ3B820 660 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 PPCSQ9HAB8 311 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 BSDC1Q9NW68 430 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 TMEM51Q9NW97 253 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 SUPT16HQ9Y5B9 1047 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 CCDC61Q9Y6R9 512 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 XRN1Q8IZH2 1706 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 IQGAP1P46940 1657 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 NRDCO43847 1150 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 LDLRAD1Q5T700 205 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 SKAP1Q86WV1 359 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 EGFL6Q8IUX8 553 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 PPLO60437 1756 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 NRXN3Q9Y4C0 1643 aa7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 CLTCQ00610 1675 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-206ENST00000559175 H3BRB1 525 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 DNAJC6O75061 913 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 CT47B1P0C2W7 299 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZNF513Q8N8E2 541 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 PRR7Q8TB68 274 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 TUT1Q9H6E5 874 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 ARHGAP23Q9P227 1491 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 DAPK1P53355 1430 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 CCDC85CA6NKD9 419 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 TSPAN18Q96SJ8 248 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 GPCPD1Q9NPB8 672 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 CRYBG1Q9Y4K1 1723 aa7.15□□□□□ -1.26
CTDSPL2-206ENST00000559175 GOLIM4O00461 696 aa7.15□□□□□ -1.27
CTDSPL2-206ENST00000559175 BRD3Q15059 726 aa7.15□□□□□ -1.27
CTDSPL2-206ENST00000559175 SENP7Q9BQF6 1050 aa7.15□□□□□ -1.27
CTDSPL2-206ENST00000559175 PCDHGB7Q9Y5F8 929 aa7.15□□□□□ -1.27
CTDSPL2-206ENST00000559175 FOSP01100 380 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 MTMR3Q13615 1198 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 CHD2O14647 1828 aaKnown RBP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 LDHCP07864 332 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 TNNT2P45379 298 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 UBE4AQ14139 1066 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 HSP90AB3PQ58FF7 597 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 FBXO22Q8NEZ5 403 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 AS3MTQ9HBK9 375 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 NRXN1Q9ULB1 1477 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 CEP170BQ9Y4F5 1589 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 TRPM1Q7Z4N2 1603 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 HSD3B2P26439 372 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 CLCN1P35523 988 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 CEP120Q8N960 986 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 NOVA2Q9UNW9 492 aaKnown RBP7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
CTDSPL2-206ENST00000559175 NAIPQ13075 1403 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 TOMM20Q15388 145 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 QPCTQ16769 361 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 FANCAO15360 1455 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 STRCP1A6NGW2 1772 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 TRPM2O94759 1503 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 PSEN1P49768 467 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms