RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 FLAD1Q8NFF5 587 aa31.61■■■□□ 2.65
ZEB1-214ENST00000558863 QSER1Q2KHR3 1735 aa31.6■■■□□ 2.65
ZEB1-214ENST00000558863 CHMP4AQ9BY43 222 aa31.6■■■□□ 2.65
ZEB1-214ENST00000558863 FANCIQ9NVI1 1328 aa31.6■■■□□ 2.65
ZEB1-214ENST00000558863 TSR2Q969E8 191 aaKnown RBP31.59■■■□□ 2.65
ZEB1-214ENST00000558863 USP16Q9Y5T5 823 aa31.59■■■□□ 2.65
ZEB1-214ENST00000558863 GNPATO15228 680 aa31.58■■■□□ 2.65
ZEB1-214ENST00000558863 RTCBQ9Y3I0 505 aaKnown RBP31.58■■■□□ 2.65
ZEB1-214ENST00000558863 ZBED9Q6R2W3 1325 aa31.58■■■□□ 2.65
ZEB1-214ENST00000558863 RPS6KA4O75676 772 aa31.57■■■□□ 2.64
ZEB1-214ENST00000558863 SSFA2P28290 1259 aa31.57■■■□□ 2.64
ZEB1-214ENST00000558863 INTS5Q6P9B9 1019 aaKnown RBP31.57■■■□□ 2.64
ZEB1-214ENST00000558863 PRAMEF22A3QJZ6 481 aa31.56■■■□□ 2.64
ZEB1-214ENST00000558863 ADRA2BP18089 450 aa31.56■■■□□ 2.64
ZEB1-214ENST00000558863 R3HDM1Q15032 1099 aaKnown RBP31.56■■■□□ 2.64
ZEB1-214ENST00000558863 DUSP27Q5VZP5 1158 aa31.56■■■□□ 2.64
ZEB1-214ENST00000558863 SPINK5Q9NQ38 1064 aaPredicted RBP31.56■■■□□ 2.64
ZEB1-214ENST00000558863 MYH14Q7Z406 1995 aaKnown RBP31.55■■■□□ 2.64
ZEB1-214ENST00000558863 UBR3Q6ZT12 1888 aa31.55■■■□□ 2.64
ZEB1-214ENST00000558863 ERBB4Q15303 1308 aa31.55■■■□□ 2.64
ZEB1-214ENST00000558863 SLFN5Q08AF3 891 aa31.55■■■□□ 2.64
ZEB1-214ENST00000558863 KRT24Q2M2I5 525 aa31.53■■■□□ 2.64
ZEB1-214ENST00000558863 ZBTB1Q9Y2K1 713 aa31.53■■■□□ 2.64
ZEB1-214ENST00000558863 TUBGCP6Q96RT7 1819 aa31.52■■■□□ 2.64
ZEB1-214ENST00000558863 PNPLA7Q6ZV29 1317 aa31.52■■■□□ 2.64
ZEB1-214ENST00000558863 IL6STP40189 918 aaPredicted RBP31.51■■■□□ 2.63
ZEB1-214ENST00000558863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.5■■■□□ 2.63
ZEB1-214ENST00000558863 A1BGP04217 495 aa31.5■■■□□ 2.63
ZEB1-214ENST00000558863 TRAPPC3LQ5T215 181 aa31.5■■■□□ 2.63
ZEB1-214ENST00000558863 NPM2Q86SE8 214 aaKnown RBP31.5■■■□□ 2.63
ZEB1-214ENST00000558863 C8orf58Q8NAV2 365 aa31.5■■■□□ 2.63
ZEB1-214ENST00000558863 EIF2S2P20042 333 aaKnown RBP31.49■■■□□ 2.63
ZEB1-214ENST00000558863 CANXP27824 592 aaKnown RBP31.49■■■□□ 2.63
ZEB1-214ENST00000558863 HDGFL1Q5TGJ6 251 aa31.49■■■□□ 2.63
ZEB1-214ENST00000558863 PSDA5PKW4 1024 aaPredicted RBP31.48■■■□□ 2.63
ZEB1-214ENST00000558863 TWISTNBQ3B726 338 aaPredicted RBP31.48■■■□□ 2.63
ZEB1-214ENST00000558863 TRMT2AQ8IZ69 625 aaKnown RBP31.48■■■□□ 2.63
ZEB1-214ENST00000558863 A0A087WZG4 1122 aa31.47■■■□□ 2.63
ZEB1-214ENST00000558863 PHF14O94880 888 aa31.47■■■□□ 2.63
ZEB1-214ENST00000558863 SLC16A10Q8TF71 515 aa31.47■■■□□ 2.63
ZEB1-214ENST00000558863 CDCA7LQ96GN5 454 aa31.47■■■□□ 2.63
ZEB1-214ENST00000558863 EIF5P55010 431 aaKnown RBP31.46■■■□□ 2.63
ZEB1-214ENST00000558863 EXOSC9Q06265 439 aaKnown RBP31.46■■■□□ 2.63
ZEB1-214ENST00000558863 COL15A1P39059 1388 aa31.46■■■□□ 2.63
ZEB1-214ENST00000558863 ELL2O00472 640 aaPredicted RBP31.45■■■□□ 2.63
ZEB1-214ENST00000558863 COL23A1Q86Y22 540 aaPredicted RBP31.45■■■□□ 2.63
ZEB1-214ENST00000558863 CCDC30Q5VVM6 783 aa31.44■■■□□ 2.62
ZEB1-214ENST00000558863 TSPYL6Q8N831 410 aa31.44■■■□□ 2.62
ZEB1-214ENST00000558863 CASZ1Q86V15 1759 aa31.44■■■□□ 2.62
ZEB1-214ENST00000558863 MSH5O43196 834 aa31.43■■■□□ 2.62
ZEB1-214ENST00000558863 RFC4P35249 363 aa31.43■■■□□ 2.62
ZEB1-214ENST00000558863 AMIGO3Q86WK7 504 aa31.43■■■□□ 2.62
ZEB1-214ENST00000558863 ARHGEF1Q92888 912 aaKnown RBP31.43■■■□□ 2.62
ZEB1-214ENST00000558863 NBPF26B4DH59 902 aa31.43■■■□□ 2.62
ZEB1-214ENST00000558863 NBPF10Q6P3W6 841 aaKnown RBP31.43■■■□□ 2.62
ZEB1-214ENST00000558863 NBPF15Q8N660 670 aa31.43■■■□□ 2.62
ZEB1-214ENST00000558863 DDX21Q9NR30 783 aaKnown RBP eCLIP31.43■■■□□ 2.62
ZEB1-214ENST00000558863 DBF4Q9UBU7 674 aaPredicted RBP31.43■■■□□ 2.62
ZEB1-214ENST00000558863 VAMP4O75379 141 aa31.4■■■□□ 2.62
ZEB1-214ENST00000558863 NECTIN2Q92692 538 aa31.4■■■□□ 2.62
ZEB1-214ENST00000558863 ZNF330Q9Y3S2 320 aaPredicted RBP31.4■■■□□ 2.62
ZEB1-214ENST00000558863 C4AP0C0L4 1744 aa31.39■■■□□ 2.62
ZEB1-214ENST00000558863 CT47B1P0C2W7 299 aaPredicted RBP31.39■■■□□ 2.62
ZEB1-214ENST00000558863 PDIA6Q15084 440 aa31.39■■■□□ 2.62
ZEB1-214ENST00000558863 ZPR1O75312 459 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 MYL6BP14649 208 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 PIP4K2AP48426 406 aaPredicted RBP31.38■■■□□ 2.61
ZEB1-214ENST00000558863 SMIM5Q71RC9 77 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 ZNF428Q96B54 188 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 STK31Q9BXU1 1019 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 HYPKQ9NX55 129 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 CHPF2Q9P2E5 772 aa31.38■■■□□ 2.61
ZEB1-214ENST00000558863 MTFR1LQ9H019 292 aa31.37■■■□□ 2.61
ZEB1-214ENST00000558863 NARFQ9UHQ1 456 aa31.37■■■□□ 2.61
ZEB1-214ENST00000558863 USP42Q9H9J4 1324 aaKnown RBP31.36■■■□□ 2.61
ZEB1-214ENST00000558863 PDGFDQ9GZP0 370 aaPredicted RBP31.36■■■□□ 2.61
ZEB1-214ENST00000558863 RGL2O15211 777 aa31.35■■■□□ 2.61
ZEB1-214ENST00000558863 DZIP3Q86Y13 1208 aaKnown RBP31.35■■■□□ 2.61
ZEB1-214ENST00000558863 LRP10Q7Z4F1 713 aa31.33■■■□□ 2.61
ZEB1-214ENST00000558863 KIF6Q6ZMV9 814 aa31.32■■■□□ 2.6
ZEB1-214ENST00000558863 NLGN1Q8N2Q7 840 aa31.32■■■□□ 2.6
ZEB1-214ENST00000558863 PROSER3Q2NL68 480 aa31.31■■■□□ 2.6
ZEB1-214ENST00000558863 ARXQ96QS3 562 aa31.31■■■□□ 2.6
ZEB1-214ENST00000558863 TBC1D2BQ9UPU7 963 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 CACNA1FO60840 1977 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 SCN7AQ01118 1682 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 ZBTB7AO95365 584 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 GYS1P13807 737 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 SPON1Q9HCB6 807 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 SRP68Q9UHB9 627 aaKnown RBP31.3■■■□□ 2.6
ZEB1-214ENST00000558863 ZNF652Q9Y2D9 606 aa31.3■■■□□ 2.6
ZEB1-214ENST00000558863 ERVV-1B6SEH8 477 aa31.29■■■□□ 2.6
ZEB1-214ENST00000558863 ANXA1P04083 346 aa31.29■■■□□ 2.6
ZEB1-214ENST00000558863 USPL1Q5W0Q7 1092 aa31.29■■■□□ 2.6
ZEB1-214ENST00000558863 CLEC4GQ6UXB4 293 aa31.29■■■□□ 2.6
ZEB1-214ENST00000558863 CAMTA2O94983 1202 aa31.28■■■□□ 2.6
ZEB1-214ENST00000558863 YTHDC1Q96MU7 727 aaKnown RBP31.28■■■□□ 2.6
ZEB1-214ENST00000558863 MAP3K15Q6ZN16 1313 aa31.27■■■□□ 2.6
ZEB1-214ENST00000558863 BCORQ6W2J9 1755 aa31.27■■■□□ 2.6
ZEB1-214ENST00000558863 COPS6Q7L5N1 327 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms