RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CHRNA5P30532 468 aa20.81■□□□□ 0.92
TPM1-211ENST00000558314 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
TPM1-211ENST00000558314 COL15A1P39059 1388 aa20.81■□□□□ 0.92
TPM1-211ENST00000558314 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
TPM1-211ENST00000558314 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 POLRMTO00411 1230 aaKnown RBP20.79■□□□□ 0.92
TPM1-211ENST00000558314 STARD3NLO95772 234 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 PPP2R1AP30153 589 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 VSIG10Q8N0Z9 540 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
TPM1-211ENST00000558314 PIM2Q9P1W9 311 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 NARFQ9UHQ1 456 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 ADCY9O60503 1353 aa20.79■□□□□ 0.92
TPM1-211ENST00000558314 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
TPM1-211ENST00000558314 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
TPM1-211ENST00000558314 TM4SF1P30408 202 aa20.77■□□□□ 0.92
TPM1-211ENST00000558314 NFIXQ14938 502 aa20.77■□□□□ 0.92
TPM1-211ENST00000558314 DALRD3Q5D0E6 543 aaKnown RBP20.77■□□□□ 0.92
TPM1-211ENST00000558314 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
TPM1-211ENST00000558314 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
TPM1-211ENST00000558314 KCNA3P22001 575 aa20.76■□□□□ 0.91
TPM1-211ENST00000558314 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
TPM1-211ENST00000558314 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
TPM1-211ENST00000558314 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
TPM1-211ENST00000558314 KCNQ3O43525 872 aa20.75■□□□□ 0.91
TPM1-211ENST00000558314 FMNL2Q96PY5 1086 aa20.75■□□□□ 0.91
TPM1-211ENST00000558314 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
TPM1-211ENST00000558314 SERPINB2P05120 415 aa20.74■□□□□ 0.91
TPM1-211ENST00000558314 MCM10Q7L590 875 aa20.74■□□□□ 0.91
TPM1-211ENST00000558314 BCL2L12Q9HB09 334 aa20.74■□□□□ 0.91
TPM1-211ENST00000558314 TBC1D2BQ9UPU7 963 aa20.74■□□□□ 0.91
TPM1-211ENST00000558314 A0A087WZG4 1122 aa20.73■□□□□ 0.91
TPM1-211ENST00000558314 A1BGP04217 495 aa20.73■□□□□ 0.91
TPM1-211ENST00000558314 C9orf131Q5VYM1 1079 aa20.73■□□□□ 0.91
TPM1-211ENST00000558314 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
TPM1-211ENST00000558314 TEX13AQ9BXU3 409 aaPredicted RBP20.72■□□□□ 0.91
TPM1-211ENST00000558314 PIP4K2AP48426 406 aaPredicted RBP20.71■□□□□ 0.91
TPM1-211ENST00000558314 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
TPM1-211ENST00000558314 UBR2Q8IWV8 1755 aa20.71■□□□□ 0.91
TPM1-211ENST00000558314 NPHP1O15259 732 aa20.7■□□□□ 0.9
TPM1-211ENST00000558314 CCDC24Q8N4L8 307 aa20.7■□□□□ 0.9
TPM1-211ENST00000558314 TBC1D9BQ66K14 1250 aa20.69■□□□□ 0.9
TPM1-211ENST00000558314 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
TPM1-211ENST00000558314 RNF181Q9P0P0 153 aa20.69■□□□□ 0.9
TPM1-211ENST00000558314 KIF3CO14782 793 aa20.68■□□□□ 0.9
TPM1-211ENST00000558314 NEFMP07197 916 aa20.68■□□□□ 0.9
TPM1-211ENST00000558314 CEMIPQ8WUJ3 1361 aa20.68■□□□□ 0.9
TPM1-211ENST00000558314 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
TPM1-211ENST00000558314 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
TPM1-211ENST00000558314 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
TPM1-211ENST00000558314 USP16Q9Y5T5 823 aa20.67■□□□□ 0.9
TPM1-211ENST00000558314 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
TPM1-211ENST00000558314 H0YIN7 160 aa20.66■□□□□ 0.9
TPM1-211ENST00000558314 IL6STP40189 918 aaPredicted RBP20.66■□□□□ 0.9
TPM1-211ENST00000558314 RASSF7Q02833 373 aa20.66■□□□□ 0.9
TPM1-211ENST00000558314 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
TPM1-211ENST00000558314 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
TPM1-211ENST00000558314 SIPA1L3O60292 1781 aaPredicted RBP20.65■□□□□ 0.9
TPM1-211ENST00000558314 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.96e-7■■□□□ 13.8
TPM1-211ENST00000558314 MIS18AQ9NYP9 233 aa20.65■□□□□ 0.9
TPM1-211ENST00000558314 HSPA6P17066 643 aa20.64■□□□□ 0.89
TPM1-211ENST00000558314 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
TPM1-211ENST00000558314 TTLL6Q8N841 843 aa20.64■□□□□ 0.89
TPM1-211ENST00000558314 ARFGEF1Q9Y6D6 1849 aa20.63■□□□□ 0.89
TPM1-211ENST00000558314 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
TPM1-211ENST00000558314 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
TPM1-211ENST00000558314 SETDB2Q96T68 719 aa20.63■□□□□ 0.89
TPM1-211ENST00000558314 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
TPM1-211ENST00000558314 PRR5LQ6MZQ0 368 aa20.61■□□□□ 0.89
TPM1-211ENST00000558314 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
TPM1-211ENST00000558314 CNBD1Q8NA66 436 aa20.6■□□□□ 0.89
TPM1-211ENST00000558314 FAM177BA6PVY3 158 aa20.59■□□□□ 0.89
TPM1-211ENST00000558314 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
TPM1-211ENST00000558314 PDE6BP35913 854 aa20.59■□□□□ 0.89
TPM1-211ENST00000558314 ST5P78524 1137 aa20.59■□□□□ 0.89
TPM1-211ENST00000558314 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
TPM1-211ENST00000558314 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 TOMM70O94826 608 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
TPM1-211ENST00000558314 BRIP1Q9BX63 1249 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 RRAGCQ9HB90 399 aa20.58■□□□□ 0.89
TPM1-211ENST00000558314 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
TPM1-211ENST00000558314 C21orf2O43822 256 aa20.57■□□□□ 0.88
TPM1-211ENST00000558314 NBPF5PQ86XG9 351 aaPredicted RBP20.56■□□□□ 0.88
TPM1-211ENST00000558314 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
TPM1-211ENST00000558314 LMNB1P20700 586 aa20.55■□□□□ 0.88
TPM1-211ENST00000558314 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
TPM1-211ENST00000558314 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
TPM1-211ENST00000558314 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
TPM1-211ENST00000558314 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
TPM1-211ENST00000558314 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
TPM1-211ENST00000558314 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
TPM1-211ENST00000558314 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
TPM1-211ENST00000558314 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
TPM1-211ENST00000558314 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
TPM1-211ENST00000558314 NFKBIEO00221 500 aa20.52■□□□□ 0.88
TPM1-211ENST00000558314 GTF2E1P29083 439 aaPredicted RBP20.52■□□□□ 0.88
TPM1-211ENST00000558314 PRELPP51888 382 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms