RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CHMP5Q9NZZ3 219 aa10.31□□□□□ -0.76
SPG11-209ENST00000558253 OVOS2A0A0G2JMS6 1433 aa10.31□□□□□ -0.76
SPG11-209ENST00000558253 NPHP4O75161 1426 aaPredicted RBP10.31□□□□□ -0.76
SPG11-209ENST00000558253 MST1RQ04912 1400 aa10.31□□□□□ -0.76
SPG11-209ENST00000558253 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 SETD1BQ9UPS6 1966 aaKnown RBP10.3□□□□□ -0.76
SPG11-209ENST00000558253 MSH6P52701 1360 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
SPG11-209ENST00000558253 GNAI2P04899 355 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 OSBPL3Q9H4L5 887 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 NCOA3Q9Y6Q9 1424 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
SPG11-209ENST00000558253 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
SPG11-209ENST00000558253 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
SPG11-209ENST00000558253 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
SPG11-209ENST00000558253 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
SPG11-209ENST00000558253 NCAPD2Q15021 1401 aa10.29□□□□□ -0.76
SPG11-209ENST00000558253 CEMIPQ8WUJ3 1361 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 NWD1Q149M9 1564 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 ATP10DQ9P241 1426 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 G3V3G9 751 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
SPG11-209ENST00000558253 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
SPG11-209ENST00000558253 PPP1R37O75864 691 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 REC8O95072 547 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 FLIIQ13045 1269 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 ESCO1Q5FWF5 840 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 IL17REQ8NFR9 667 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 AOX1Q06278 1338 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 NFAT5O94916 1531 aa10.27□□□□□ -0.77
SPG11-209ENST00000558253 FOXO3O43524 673 aa10.26□□□□□ -0.77
SPG11-209ENST00000558253 RAB11FIP3O75154 756 aa10.26□□□□□ -0.77
SPG11-209ENST00000558253 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
SPG11-209ENST00000558253 ARHGEF25Q86VW2 580 aa10.26□□□□□ -0.77
SPG11-209ENST00000558253 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SPG11-209ENST00000558253 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
SPG11-209ENST00000558253 RGPD8O14715 1765 aaPredicted RBP10.25□□□□□ -0.77
SPG11-209ENST00000558253 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
SPG11-209ENST00000558253 FKBP5Q13451 457 aaPredicted RBP10.25□□□□□ -0.77
SPG11-209ENST00000558253 RABEP1Q15276 862 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 HSP90AB4PQ58FF6 505 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 MEIS3Q99687 375 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 C19orf44Q9H6X5 657 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
SPG11-209ENST00000558253 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
SPG11-209ENST00000558253 MARF1Q9Y4F3 1742 aaKnown RBP10.24□□□□□ -0.77
SPG11-209ENST00000558253 SLIT3O75094 1523 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 ST18O60284 1047 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 C1orf141Q5JVX7 400 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 DCCP43146 1447 aa10.24□□□□□ -0.77
SPG11-209ENST00000558253 KIF1AQ12756 1690 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 GCP02774 474 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 HSP90AB1P08238 724 aaKnown RBP10.23□□□□□ -0.77
SPG11-209ENST00000558253 EIF4A1P60842 406 aaKnown RBP10.23□□□□□ -0.77
SPG11-209ENST00000558253 TEFQ10587 303 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
SPG11-209ENST00000558253 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 SLC4A10Q6U841 1118 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
SPG11-209ENST00000558253 ISY1Q9ULR0 285 aaKnown RBP10.23□□□□□ -0.77
SPG11-209ENST00000558253 MED1Q15648 1581 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 K7ELQ4 463 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 ERC2O15083 957 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 UBTFL1P0CB47 393 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 GSPT1P15170 499 aaKnown RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 DDIT3P35638 169 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 MCM2P49736 904 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 NBPF6Q5VWK0 638 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 NUTM2GQ5VZR2 741 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 G2E3Q7L622 706 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 PROSER2Q86WR7 435 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 NBPF4Q96M43 638 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 GBP4Q96PP9 640 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 SLKQ9H2G2 1235 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
SPG11-209ENST00000558253 ABCC6O95255 1503 aa10.22□□□□□ -0.77
SPG11-209ENST00000558253 ALDH1L1O75891 902 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 SDSP20132 328 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 MCM4P33991 863 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 PDE1AP54750 535 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 SKOR2Q2VWA4 1001 aaPredicted RBP10.21□□□□□ -0.77
SPG11-209ENST00000558253 ZNF530Q6P9A1 599 aaPredicted RBP10.21□□□□□ -0.77
SPG11-209ENST00000558253 KRT28Q7Z3Y7 464 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 SSH3Q8TE77 659 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 UBE2Q2Q8WVN8 375 aa10.21□□□□□ -0.77
SPG11-209ENST00000558253 USP26Q9BXU7 913 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms