RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 HSPA6P17066 643 aa13.04□□□□□ -0.32
AC009996.1-201ENST00000558006 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
AC009996.1-201ENST00000558006 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
AC009996.1-201ENST00000558006 ATG3Q9NT62 314 aa13.04□□□□□ -0.32
AC009996.1-201ENST00000558006 KIF3CO14782 793 aa13.03□□□□□ -0.32
AC009996.1-201ENST00000558006 MMP10P09238 476 aa13.03□□□□□ -0.32
AC009996.1-201ENST00000558006 PHKG2P15735 406 aa13.03□□□□□ -0.32
AC009996.1-201ENST00000558006 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.33
AC009996.1-201ENST00000558006 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
AC009996.1-201ENST00000558006 BRCA1P38398 1863 aaKnown RBP13□□□□□ -0.33
AC009996.1-201ENST00000558006 KDRP35968 1356 aa13□□□□□ -0.33
AC009996.1-201ENST00000558006 A0A0G2JLW4 131 aa13□□□□□ -0.33
AC009996.1-201ENST00000558006 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
AC009996.1-201ENST00000558006 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
AC009996.1-201ENST00000558006 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
AC009996.1-201ENST00000558006 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
AC009996.1-201ENST00000558006 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
AC009996.1-201ENST00000558006 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
AC009996.1-201ENST00000558006 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
AC009996.1-201ENST00000558006 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
AC009996.1-201ENST00000558006 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
AC009996.1-201ENST00000558006 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
AC009996.1-201ENST00000558006 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 GYS1P13807 737 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 DPEP1P16444 411 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 TGFB2P61812 414 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
AC009996.1-201ENST00000558006 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
AC009996.1-201ENST00000558006 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
AC009996.1-201ENST00000558006 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
AC009996.1-201ENST00000558006 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
AC009996.1-201ENST00000558006 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
AC009996.1-201ENST00000558006 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
AC009996.1-201ENST00000558006 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 KCNA3P22001 575 aa12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 PANK3Q9H999 370 aa12.94□□□□□ -0.34
AC009996.1-201ENST00000558006 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 TOMM70O94826 608 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 FCHSD2O94868 740 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 RFC4P35249 363 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 DNAJC5GQ8N7S2 189 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 TJP1Q07157 1748 aa12.93□□□□□ -0.34
AC009996.1-201ENST00000558006 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 CABP4P57796 275 aa12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
AC009996.1-201ENST00000558006 SBF1O95248 1867 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 PPP1R37O75864 691 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 APLP1P51693 650 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 HTRA3P83110 453 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
AC009996.1-201ENST00000558006 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 MTHFSP49914 203 aa12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 DDR1Q08345 913 aa12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
AC009996.1-201ENST00000558006 CHRNA5P30532 468 aa12.89□□□□□ -0.35
AC009996.1-201ENST00000558006 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
AC009996.1-201ENST00000558006 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
AC009996.1-201ENST00000558006 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
AC009996.1-201ENST00000558006 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
AC009996.1-201ENST00000558006 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
AC009996.1-201ENST00000558006 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
AC009996.1-201ENST00000558006 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
AC009996.1-201ENST00000558006 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
AC009996.1-201ENST00000558006 TIE1P35590 1138 aa12.86□□□□□ -0.35
AC009996.1-201ENST00000558006 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
AC009996.1-201ENST00000558006 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
AC009996.1-201ENST00000558006 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
AC009996.1-201ENST00000558006 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
AC009996.1-201ENST00000558006 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms