RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 CCDC87Q9NVE4 849 aa26.24■■□□□ 1.79
LINC01956-201ENST00000557729 PSDA5PKW4 1024 aaPredicted RBP26.23■■□□□ 1.79
LINC01956-201ENST00000557729 RTCBQ9Y3I0 505 aaKnown RBP26.23■■□□□ 1.79
LINC01956-201ENST00000557729 FANCIQ9NVI1 1328 aa26.22■■□□□ 1.79
LINC01956-201ENST00000557729 E9PSI1 815 aa26.22■■□□□ 1.79
LINC01956-201ENST00000557729 KRT24Q2M2I5 525 aa26.21■■□□□ 1.79
LINC01956-201ENST00000557729 INTS5Q6P9B9 1019 aaKnown RBP26.21■■□□□ 1.79
LINC01956-201ENST00000557729 FLAD1Q8NFF5 587 aa26.21■■□□□ 1.79
LINC01956-201ENST00000557729 SPINK5Q9NQ38 1064 aaPredicted RBP26.21■■□□□ 1.79
LINC01956-201ENST00000557729 RPS6KA4O75676 772 aa26.2■■□□□ 1.78
LINC01956-201ENST00000557729 PHF14O94880 888 aa26.2■■□□□ 1.78
LINC01956-201ENST00000557729 HOXB7P09629 217 aa26.2■■□□□ 1.78
LINC01956-201ENST00000557729 EIF2S2P20042 333 aaKnown RBP26.2■■□□□ 1.78
LINC01956-201ENST00000557729 SSFA2P28290 1259 aa26.2■■□□□ 1.78
LINC01956-201ENST00000557729 DUSP27Q5VZP5 1158 aa26.2■■□□□ 1.78
LINC01956-201ENST00000557729 CANXP27824 592 aaKnown RBP26.19■■□□□ 1.78
LINC01956-201ENST00000557729 NPM2Q86SE8 214 aaKnown RBP26.19■■□□□ 1.78
LINC01956-201ENST00000557729 ZBTB1Q9Y2K1 713 aa26.19■■□□□ 1.78
LINC01956-201ENST00000557729 LAMB4A4D0S4 1761 aa26.19■■□□□ 1.78
LINC01956-201ENST00000557729 ELL2O00472 640 aaPredicted RBP26.18■■□□□ 1.78
LINC01956-201ENST00000557729 MSH5O43196 834 aa26.18■■□□□ 1.78
LINC01956-201ENST00000557729 A1BGP04217 495 aa26.18■■□□□ 1.78
LINC01956-201ENST00000557729 PNPLA7Q6ZV29 1317 aa26.17■■□□□ 1.78
LINC01956-201ENST00000557729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.17■■□□□ 1.78
LINC01956-201ENST00000557729 SLFN5Q08AF3 891 aa26.17■■□□□ 1.78
LINC01956-201ENST00000557729 TRAPPC3LQ5T215 181 aa26.17■■□□□ 1.78
LINC01956-201ENST00000557729 ZBED9Q6R2W3 1325 aa26.16■■□□□ 1.78
LINC01956-201ENST00000557729 ADRA2BP18089 450 aa26.16■■□□□ 1.78
LINC01956-201ENST00000557729 C8orf58Q8NAV2 365 aa26.16■■□□□ 1.78
LINC01956-201ENST00000557729 CHMP4AQ9BY43 222 aa26.16■■□□□ 1.78
LINC01956-201ENST00000557729 ZNF330Q9Y3S2 320 aaPredicted RBP26.16■■□□□ 1.78
LINC01956-201ENST00000557729 SOS1Q07889 1333 aaPredicted RBP26.15■■□□□ 1.78
LINC01956-201ENST00000557729 UBR3Q6ZT12 1888 aa26.15■■□□□ 1.78
LINC01956-201ENST00000557729 MYH14Q7Z406 1995 aaKnown RBP26.15■■□□□ 1.78
LINC01956-201ENST00000557729 QSER1Q2KHR3 1735 aa26.15■■□□□ 1.78
LINC01956-201ENST00000557729 HDGFL1Q5TGJ6 251 aa26.15■■□□□ 1.78
LINC01956-201ENST00000557729 CDCA7LQ96GN5 454 aa26.15■■□□□ 1.78
LINC01956-201ENST00000557729 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.78
LINC01956-201ENST00000557729 IL6STP40189 918 aaPredicted RBP26.14■■□□□ 1.78
LINC01956-201ENST00000557729 EXOSC9Q06265 439 aaKnown RBP26.14■■□□□ 1.78
LINC01956-201ENST00000557729 TWISTNBQ3B726 338 aaPredicted RBP26.14■■□□□ 1.78
LINC01956-201ENST00000557729 SMIM5Q71RC9 77 aa26.14■■□□□ 1.78
LINC01956-201ENST00000557729 COL23A1Q86Y22 540 aaPredicted RBP26.14■■□□□ 1.78
LINC01956-201ENST00000557729 NECTIN2Q92692 538 aa26.14■■□□□ 1.78
LINC01956-201ENST00000557729 ERBB4Q15303 1308 aa26.14■■□□□ 1.77
LINC01956-201ENST00000557729 PIP4K2AP48426 406 aaPredicted RBP26.13■■□□□ 1.77
LINC01956-201ENST00000557729 AMIGO3Q86WK7 504 aa26.13■■□□□ 1.77
LINC01956-201ENST00000557729 RFC4P35249 363 aa26.12■■□□□ 1.77
LINC01956-201ENST00000557729 TSPYL6Q8N831 410 aa26.12■■□□□ 1.77
LINC01956-201ENST00000557729 ARHGEF1Q92888 912 aaKnown RBP26.12■■□□□ 1.77
LINC01956-201ENST00000557729 COL15A1P39059 1388 aa26.11■■□□□ 1.77
LINC01956-201ENST00000557729 A0A087WZG4 1122 aa26.11■■□□□ 1.77
LINC01956-201ENST00000557729 EIF5P55010 431 aaKnown RBP26.11■■□□□ 1.77
LINC01956-201ENST00000557729 MYL6BP14649 208 aa26.1■■□□□ 1.77
LINC01956-201ENST00000557729 ARXQ96QS3 562 aa26.1■■□□□ 1.77
LINC01956-201ENST00000557729 NBPF26B4DH59 902 aa26.09■■□□□ 1.77
LINC01956-201ENST00000557729 CCDC30Q5VVM6 783 aa26.09■■□□□ 1.77
LINC01956-201ENST00000557729 NBPF10Q6P3W6 841 aaKnown RBP26.09■■□□□ 1.77
LINC01956-201ENST00000557729 NBPF15Q8N660 670 aa26.09■■□□□ 1.77
LINC01956-201ENST00000557729 SLC16A10Q8TF71 515 aa26.09■■□□□ 1.77
LINC01956-201ENST00000557729 PDGFDQ9GZP0 370 aaPredicted RBP26.09■■□□□ 1.77
LINC01956-201ENST00000557729 DBF4Q9UBU7 674 aaPredicted RBP26.08■■□□□ 1.77
LINC01956-201ENST00000557729 ZPR1O75312 459 aa26.07■■□□□ 1.76
LINC01956-201ENST00000557729 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
LINC01956-201ENST00000557729 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
LINC01956-201ENST00000557729 DDX21Q9NR30 783 aaKnown RBP eCLIP26.07■■□□□ 1.76
LINC01956-201ENST00000557729 CASZ1Q86V15 1759 aa26.06■■□□□ 1.76
LINC01956-201ENST00000557729 CHPF2Q9P2E5 772 aa26.06■■□□□ 1.76
LINC01956-201ENST00000557729 VAMP4O75379 141 aa26.05■■□□□ 1.76
LINC01956-201ENST00000557729 DZIP3Q86Y13 1208 aaKnown RBP26.05■■□□□ 1.76
LINC01956-201ENST00000557729 STK31Q9BXU1 1019 aa26.05■■□□□ 1.76
LINC01956-201ENST00000557729 ZBTB7AO95365 584 aa26.04■■□□□ 1.76
LINC01956-201ENST00000557729 PDIA6Q15084 440 aa26.04■■□□□ 1.76
LINC01956-201ENST00000557729 MTFR1LQ9H019 292 aa26.04■■□□□ 1.76
LINC01956-201ENST00000557729 NARFQ9UHQ1 456 aa26.04■■□□□ 1.76
LINC01956-201ENST00000557729 TBC1D2BQ9UPU7 963 aa26.04■■□□□ 1.76
LINC01956-201ENST00000557729 ANXA1P04083 346 aa26.03■■□□□ 1.76
LINC01956-201ENST00000557729 HYPKQ9NX55 129 aa26.03■■□□□ 1.76
LINC01956-201ENST00000557729 USP42Q9H9J4 1324 aaKnown RBP26.03■■□□□ 1.76
LINC01956-201ENST00000557729 PROSER3Q2NL68 480 aa26.02■■□□□ 1.76
LINC01956-201ENST00000557729 USPL1Q5W0Q7 1092 aa26.02■■□□□ 1.76
LINC01956-201ENST00000557729 SRP68Q9UHB9 627 aaKnown RBP26.02■■□□□ 1.76
LINC01956-201ENST00000557729 C4AP0C0L4 1744 aa26.02■■□□□ 1.76
LINC01956-201ENST00000557729 KIF6Q6ZMV9 814 aa26.01■■□□□ 1.75
LINC01956-201ENST00000557729 TCERG1O14776 1098 aaKnown RBP26■■□□□ 1.75
LINC01956-201ENST00000557729 MSL1Q68DK7 614 aa26■■□□□ 1.75
LINC01956-201ENST00000557729 ATF5Q9Y2D1 282 aaPredicted RBP26■■□□□ 1.75
LINC01956-201ENST00000557729 GYS1P13807 737 aa25.99■■□□□ 1.75
LINC01956-201ENST00000557729 AIMP1Q12904 312 aaKnown RBP25.99■■□□□ 1.75
LINC01956-201ENST00000557729 NLGN1Q8N2Q7 840 aa25.99■■□□□ 1.75
LINC01956-201ENST00000557729 SPON1Q9HCB6 807 aa25.99■■□□□ 1.75
LINC01956-201ENST00000557729 CT47B1P0C2W7 299 aaPredicted RBP25.98■■□□□ 1.75
LINC01956-201ENST00000557729 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
LINC01956-201ENST00000557729 LRP10Q7Z4F1 713 aa25.98■■□□□ 1.75
LINC01956-201ENST00000557729 XAGE3Q8WTP9 111 aa25.98■■□□□ 1.75
LINC01956-201ENST00000557729 CAMTA2O94983 1202 aa25.97■■□□□ 1.75
LINC01956-201ENST00000557729 TTLL7Q6ZT98 887 aa25.97■■□□□ 1.75
LINC01956-201ENST00000557729 ZNF428Q96B54 188 aa25.97■■□□□ 1.75
LINC01956-201ENST00000557729 ZNF652Q9Y2D9 606 aa25.97■■□□□ 1.75
LINC01956-201ENST00000557729 SLC4A2P04920 1241 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms