RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
FOXN3-218ENST00000557718 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
FOXN3-218ENST00000557718 MYOM2P54296 1465 aa8.59□□□□□ -1.03
FOXN3-218ENST00000557718 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
FOXN3-218ENST00000557718 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
FOXN3-218ENST00000557718 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
FOXN3-218ENST00000557718 AGERQ15109 404 aa8.59□□□□□ -1.03
FOXN3-218ENST00000557718 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
FOXN3-218ENST00000557718 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
FOXN3-218ENST00000557718 NXF1Q9UBU9 619 aaKnown RBP8.59□□□□□ -1.03
FOXN3-218ENST00000557718 UHRF1BP1Q6BDS2 1440 aa8.59□□□□□ -1.03
FOXN3-218ENST00000557718 LAMC1P11047 1609 aa8.58□□□□□ -1.04
FOXN3-218ENST00000557718 ZFYVE9O95405 1425 aa8.58□□□□□ -1.04
FOXN3-218ENST00000557718 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
FOXN3-218ENST00000557718 BPHLQ86WA6 291 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-218ENST00000557718 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
FOXN3-218ENST00000557718 SLIT1O75093 1534 aa8.58□□□□□ -1.04
FOXN3-218ENST00000557718 ARHGAP23Q9P227 1491 aa8.57□□□□□ -1.04
FOXN3-218ENST00000557718 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 INSM1Q01101 510 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
FOXN3-218ENST00000557718 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-218ENST00000557718 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
FOXN3-218ENST00000557718 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
FOXN3-218ENST00000557718 ASXL1Q8IXJ9 1541 aa8.57□□□□□ -1.04
FOXN3-218ENST00000557718 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 NR5A1Q13285 461 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 RGL3Q3MIN7 710 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 ARMC2Q8NEN0 867 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 RALGAPBQ86X10 1494 aa8.56□□□□□ -1.04
FOXN3-218ENST00000557718 ARHGEF28Q8N1W1 1705 aaKnown RBP8.55□□□□□ -1.04
FOXN3-218ENST00000557718 NR3C2P08235 984 aa8.55□□□□□ -1.04
FOXN3-218ENST00000557718 GRM5P41594 1212 aa8.55□□□□□ -1.04
FOXN3-218ENST00000557718 SCARF1Q14162 830 aa8.55□□□□□ -1.04
FOXN3-218ENST00000557718 NPAS3Q8IXF0 933 aa8.55□□□□□ -1.04
FOXN3-218ENST00000557718 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
FOXN3-218ENST00000557718 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
FOXN3-218ENST00000557718 PIK3C2GO75747 1445 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 ADGRB1O14514 1584 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 SETBP1Q9Y6X0 1596 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 ZIC2O95409 532 aaPredicted RBP8.54□□□□□ -1.04
FOXN3-218ENST00000557718 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 KNDC1Q76NI1 1749 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 ADGRF5Q8IZF2 1346 aa8.54□□□□□ -1.04
FOXN3-218ENST00000557718 VEGFBP49765 207 aa8.53□□□□□ -1.04
FOXN3-218ENST00000557718 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
FOXN3-218ENST00000557718 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
FOXN3-218ENST00000557718 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
FOXN3-218ENST00000557718 CHD2O14647 1828 aaKnown RBP8.52□□□□□ -1.04
FOXN3-218ENST00000557718 LMTK3Q96Q04 1460 aa8.52□□□□□ -1.05
FOXN3-218ENST00000557718 TMEM2Q9UHN6 1383 aa8.52□□□□□ -1.05
FOXN3-218ENST00000557718 H3BM21 787 aa8.52□□□□□ -1.05
FOXN3-218ENST00000557718 SH3BP5LQ7L8J4 393 aa8.52□□□□□ -1.05
FOXN3-218ENST00000557718 STRCP1A6NGW2 1772 aa8.51□□□□□ -1.05
FOXN3-218ENST00000557718 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
FOXN3-218ENST00000557718 IRF7Q92985 503 aa8.51□□□□□ -1.05
FOXN3-218ENST00000557718 RPGRIP1LQ68CZ1 1315 aa8.51□□□□□ -1.05
FOXN3-218ENST00000557718 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 QRICH2Q9H0J4 1663 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 MAGEB6P1A0A0J9YX57 407 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 GMPRP36959 345 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
FOXN3-218ENST00000557718 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
FOXN3-218ENST00000557718 XRN1Q8IZH2 1706 aaKnown RBP8.5□□□□□ -1.05
FOXN3-218ENST00000557718 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 MED14O60244 1454 aa8.5□□□□□ -1.05
FOXN3-218ENST00000557718 ADAMTS13Q76LX8 1427 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 FSHRP23945 695 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 LTKP29376 864 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
FOXN3-218ENST00000557718 SCAF11Q99590 1463 aaKnown RBP8.49□□□□□ -1.05
FOXN3-218ENST00000557718 ERBB4Q15303 1308 aa8.49□□□□□ -1.05
FOXN3-218ENST00000557718 DIP2AQ14689 1571 aa8.48□□□□□ -1.05
FOXN3-218ENST00000557718 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
FOXN3-218ENST00000557718 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
FOXN3-218ENST00000557718 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
FOXN3-218ENST00000557718 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
FOXN3-218ENST00000557718 CFAP70Q5T0N1 1121 aa8.47□□□□□ -1.05
FOXN3-218ENST00000557718 MEIOBQ8N635 442 aa8.47□□□□□ -1.05
FOXN3-218ENST00000557718 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
FOXN3-218ENST00000557718 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
FOXN3-218ENST00000557718 PLEKHG1Q9ULL1 1385 aa8.47□□□□□ -1.05
FOXN3-218ENST00000557718 CPS1P31327 1500 aa8.46□□□□□ -1.05
FOXN3-218ENST00000557718 MAN1A2O60476 641 aa8.46□□□□□ -1.06
FOXN3-218ENST00000557718 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
FOXN3-218ENST00000557718 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
FOXN3-218ENST00000557718 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
FOXN3-218ENST00000557718 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms