RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
SUPT16H-208ENST00000557652 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
SUPT16H-208ENST00000557652 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
SUPT16H-208ENST00000557652 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
SUPT16H-208ENST00000557652 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
SUPT16H-208ENST00000557652 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
SUPT16H-208ENST00000557652 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
SUPT16H-208ENST00000557652 AK7Q96M32 723 aa18.23■□□□□ 0.51
SUPT16H-208ENST00000557652 CCDC87Q9NVE4 849 aa18.23■□□□□ 0.51
SUPT16H-208ENST00000557652 SSFA2P28290 1259 aa18.22■□□□□ 0.51
SUPT16H-208ENST00000557652 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
SUPT16H-208ENST00000557652 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
SUPT16H-208ENST00000557652 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 IL6STP40189 918 aaPredicted RBP18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
SUPT16H-208ENST00000557652 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
SUPT16H-208ENST00000557652 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
SUPT16H-208ENST00000557652 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
SUPT16H-208ENST00000557652 A0A087WZG4 1122 aa18.19■□□□□ 0.5
SUPT16H-208ENST00000557652 RGL2O15211 777 aa18.19■□□□□ 0.5
SUPT16H-208ENST00000557652 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
SUPT16H-208ENST00000557652 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
SUPT16H-208ENST00000557652 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
SUPT16H-208ENST00000557652 GNPATO15228 680 aa18.18■□□□□ 0.5
SUPT16H-208ENST00000557652 KCNQ4P56696 695 aa18.18■□□□□ 0.5
SUPT16H-208ENST00000557652 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
SUPT16H-208ENST00000557652 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
SUPT16H-208ENST00000557652 DBF4Q9UBU7 674 aaPredicted RBP18.18■□□□□ 0.5
SUPT16H-208ENST00000557652 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
SUPT16H-208ENST00000557652 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
SUPT16H-208ENST00000557652 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
SUPT16H-208ENST00000557652 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
SUPT16H-208ENST00000557652 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
SUPT16H-208ENST00000557652 EIF5P55010 431 aaKnown RBP18.16■□□□□ 0.5
SUPT16H-208ENST00000557652 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
SUPT16H-208ENST00000557652 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
SUPT16H-208ENST00000557652 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
SUPT16H-208ENST00000557652 CASZ1Q86V15 1759 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 PRAMEF22A3QJZ6 481 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 VAMP4O75379 141 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 STK31Q9BXU1 1019 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 COL15A1P39059 1388 aa18.15■□□□□ 0.5
SUPT16H-208ENST00000557652 A1BGP04217 495 aa18.14■□□□□ 0.49
SUPT16H-208ENST00000557652 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.49
SUPT16H-208ENST00000557652 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
SUPT16H-208ENST00000557652 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
SUPT16H-208ENST00000557652 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
SUPT16H-208ENST00000557652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
SUPT16H-208ENST00000557652 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
SUPT16H-208ENST00000557652 TSPYL6Q8N831 410 aa18.13■□□□□ 0.49
SUPT16H-208ENST00000557652 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
SUPT16H-208ENST00000557652 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
SUPT16H-208ENST00000557652 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
SUPT16H-208ENST00000557652 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
SUPT16H-208ENST00000557652 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 RFC4P35249 363 aa18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 PDIA6Q15084 440 aa18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 NBPF10Q6P3W6 841 aaKnown RBP18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 NBPF15Q8N660 670 aa18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 NUP98P52948 1817 aa18.11■□□□□ 0.49
SUPT16H-208ENST00000557652 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
SUPT16H-208ENST00000557652 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
SUPT16H-208ENST00000557652 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
SUPT16H-208ENST00000557652 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 ZPR1O75312 459 aa18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 R3HDM1Q15032 1099 aaKnown RBP18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 CLEC4GQ6UXB4 293 aa18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 ZNF652Q9Y2D9 606 aa18.09■□□□□ 0.49
SUPT16H-208ENST00000557652 USP42Q9H9J4 1324 aaKnown RBP18.08■□□□□ 0.49
SUPT16H-208ENST00000557652 KIF6Q6ZMV9 814 aa18.08■□□□□ 0.48
SUPT16H-208ENST00000557652 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.48
SUPT16H-208ENST00000557652 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
SUPT16H-208ENST00000557652 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
SUPT16H-208ENST00000557652 DZIP3Q86Y13 1208 aaKnown RBP18.07■□□□□ 0.48
SUPT16H-208ENST00000557652 NLGN1Q8N2Q7 840 aa18.07■□□□□ 0.48
SUPT16H-208ENST00000557652 PHF14O94880 888 aa18.06■□□□□ 0.48
SUPT16H-208ENST00000557652 MYL6BP14649 208 aa18.06■□□□□ 0.48
SUPT16H-208ENST00000557652 YTHDC1Q96MU7 727 aaKnown RBP18.06■□□□□ 0.48
SUPT16H-208ENST00000557652 MTFR1LQ9H019 292 aa18.06■□□□□ 0.48
SUPT16H-208ENST00000557652 MAP3K15Q6ZN16 1313 aa18.05■□□□□ 0.48
SUPT16H-208ENST00000557652 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
SUPT16H-208ENST00000557652 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
SUPT16H-208ENST00000557652 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
SUPT16H-208ENST00000557652 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
SUPT16H-208ENST00000557652 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
SUPT16H-208ENST00000557652 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
SUPT16H-208ENST00000557652 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
SUPT16H-208ENST00000557652 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
SUPT16H-208ENST00000557652 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
SUPT16H-208ENST00000557652 PTPRCP08575 1304 aa18.03■□□□□ 0.48
SUPT16H-208ENST00000557652 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
SUPT16H-208ENST00000557652 MSH5O43196 834 aa18.03■□□□□ 0.48
SUPT16H-208ENST00000557652 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms