RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 NIP7Q9Y221 180 aaKnown RBP eCLIP20.58■□□□□ 0.89
PTPN21-208ENST00000556564 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.89
PTPN21-208ENST00000556564 IP6K1Q92551 441 aa20.58■□□□□ 0.89
PTPN21-208ENST00000556564 PCDH11XQ9BZA7 1347 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 PCDH11YQ9BZA8 1340 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 ABCA8O94911 1581 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 MCM2P49736 904 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 SLAIN2Q9P270 581 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.88
PTPN21-208ENST00000556564 TMEM2Q9UHN6 1383 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 EPS15P42566 896 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 LTKP29376 864 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 SDF4Q9BRK5 362 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
PTPN21-208ENST00000556564 FAM98CQ17RN3 349 aaKnown RBP20.56■□□□□ 0.88
PTPN21-208ENST00000556564 DZIP3Q86Y13 1208 aaKnown RBP20.56■□□□□ 0.88
PTPN21-208ENST00000556564 CARD14Q9BXL6 1004 aa20.56■□□□□ 0.88
PTPN21-208ENST00000556564 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
PTPN21-208ENST00000556564 MAP3K19Q56UN5 1328 aa20.56■□□□□ 0.88
PTPN21-208ENST00000556564 TXLNAP40222 546 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 STK38Q15208 465 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 NAPBQ9H115 298 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 ZNF396Q96N95 335 aaPredicted RBP20.55■□□□□ 0.88
PTPN21-208ENST00000556564 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
PTPN21-208ENST00000556564 ARID3AQ99856 593 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
PTPN21-208ENST00000556564 CASTP20810 708 aaKnown RBP20.54■□□□□ 0.88
PTPN21-208ENST00000556564 PDCP20941 246 aa20.54■□□□□ 0.88
PTPN21-208ENST00000556564 TESK2Q96S53 571 aa20.54■□□□□ 0.88
PTPN21-208ENST00000556564 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 COL17A1Q9UMD9 1497 aaPredicted RBP20.53■□□□□ 0.88
PTPN21-208ENST00000556564 IL16Q14005 1332 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 NBPF14Q5TI25 921 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
PTPN21-208ENST00000556564 SLF2Q8IX21 1173 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 GOLIM4O00461 696 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 ZNF76P36508 570 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
PTPN21-208ENST00000556564 FIBPO43427 364 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 C8orf58Q8NAV2 365 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 USP21Q9UK80 565 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 ANKRD18AQ8IVF6 992 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
PTPN21-208ENST00000556564 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
PTPN21-208ENST00000556564 ZHX3Q9H4I2 956 aa20.52■□□□□ 0.88
PTPN21-208ENST00000556564 RANBP6O60518 1105 aaKnown RBP20.52■□□□□ 0.88
PTPN21-208ENST00000556564 KRT32Q14532 448 aa20.51■□□□□ 0.87
PTPN21-208ENST00000556564 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
PTPN21-208ENST00000556564 IPO7O95373 1038 aaKnown RBP20.51■□□□□ 0.87
PTPN21-208ENST00000556564 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
PTPN21-208ENST00000556564 CDKL5O76039 1030 aa20.51■□□□□ 0.87
PTPN21-208ENST00000556564 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
PTPN21-208ENST00000556564 ARHGEF12Q9NZN5 1544 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 GNPATO15228 680 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 POLD1P28340 1107 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 SAMD9LQ8IVG5 1584 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 NLRP3Q96P20 1036 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
PTPN21-208ENST00000556564 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
PTPN21-208ENST00000556564 F8W031 263 aaPredicted RBP20.49■□□□□ 0.87
PTPN21-208ENST00000556564 CCDC96Q2M329 555 aa20.49■□□□□ 0.87
PTPN21-208ENST00000556564 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
PTPN21-208ENST00000556564 TSHZ3Q63HK5 1081 aa20.49■□□□□ 0.87
PTPN21-208ENST00000556564 LARP1BQ659C4 914 aaKnown RBP20.49■□□□□ 0.87
PTPN21-208ENST00000556564 IQSEC3Q9UPP2 1182 aaPredicted RBP20.48■□□□□ 0.87
PTPN21-208ENST00000556564 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
PTPN21-208ENST00000556564 SKAP1Q86WV1 359 aa20.48■□□□□ 0.87
PTPN21-208ENST00000556564 DDX11Q96FC9 970 aa20.48■□□□□ 0.87
PTPN21-208ENST00000556564 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
PTPN21-208ENST00000556564 NOL7Q9UMY1 257 aaKnown RBP20.48■□□□□ 0.87
PTPN21-208ENST00000556564 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
PTPN21-208ENST00000556564 ERCC6L2Q5T890 1561 aa20.47■□□□□ 0.87
PTPN21-208ENST00000556564 PRPF40AO75400 957 aaKnown RBP20.47■□□□□ 0.87
PTPN21-208ENST00000556564 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
PTPN21-208ENST00000556564 SEC63Q9UGP8 760 aaKnown RBP20.47■□□□□ 0.87
PTPN21-208ENST00000556564 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
PTPN21-208ENST00000556564 ZNF592Q92610 1267 aa20.47■□□□□ 0.87
PTPN21-208ENST00000556564 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
PTPN21-208ENST00000556564 WDR78Q5VTH9 848 aa20.47■□□□□ 0.87
PTPN21-208ENST00000556564 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
PTPN21-208ENST00000556564 NAP1L1P55209 391 aaKnown RBP20.46■□□□□ 0.87
PTPN21-208ENST00000556564 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
PTPN21-208ENST00000556564 ZNF213O14771 459 aa20.46■□□□□ 0.87
PTPN21-208ENST00000556564 NAT10Q9H0A0 1025 aaKnown RBP20.46■□□□□ 0.87
PTPN21-208ENST00000556564 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
PTPN21-208ENST00000556564 CHMP4BP1P59074 171 aa20.46■□□□□ 0.87
PTPN21-208ENST00000556564 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PTPN21-208ENST00000556564 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.86
PTPN21-208ENST00000556564 TTF1Q15361 905 aaPredicted RBP20.45■□□□□ 0.86
PTPN21-208ENST00000556564 TRAPPC3LQ5T215 181 aa20.45■□□□□ 0.86
PTPN21-208ENST00000556564 PDILTQ8N807 584 aa20.45■□□□□ 0.86
PTPN21-208ENST00000556564 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
PTPN21-208ENST00000556564 ME1P48163 572 aa20.45■□□□□ 0.86
PTPN21-208ENST00000556564 MEIS3Q99687 375 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms