RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
HNRNPC-225ENST00000556513 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 MMP10P09238 476 aa13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
HNRNPC-225ENST00000556513 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 KIF13BQ9NQT8 1826 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 GYS1P13807 737 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 ERICH6BQ5W0A0 696 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-225ENST00000556513 STARD3NLO95772 234 aa13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
HNRNPC-225ENST00000556513 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 GPR162Q16538 588 aa13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 COL15A1P39059 1388 aa13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
HNRNPC-225ENST00000556513 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 ZPR1O75312 459 aa13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 FKBP8Q14318 412 aa13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 USPL1Q5W0Q7 1092 aa13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 ZNF330Q9Y3S2 320 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-225ENST00000556513 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 RIPK4P57078 832 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
HNRNPC-225ENST00000556513 A1BGP04217 495 aa13.58□□□□□ -0.24
HNRNPC-225ENST00000556513 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-225ENST00000556513 USP16Q9Y5T5 823 aa13.58□□□□□ -0.24
HNRNPC-225ENST00000556513 PARP3Q9Y6F1 533 aa13.58□□□□□ -0.24
HNRNPC-225ENST00000556513 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
HNRNPC-225ENST00000556513 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-225ENST00000556513 BCORQ6W2J9 1755 aa13.57□□□□□ -0.24
HNRNPC-225ENST00000556513 YY1P25490 414 aa13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 BRCA1P38398 1863 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 DDR1Q08345 913 aa13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-225ENST00000556513 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
HNRNPC-225ENST00000556513 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-225ENST00000556513 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
HNRNPC-225ENST00000556513 C10orf71Q711Q0 1435 aa13.55□□□□□ -0.24
HNRNPC-225ENST00000556513 A0A087WZG4 1122 aa13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 LMOD3Q0VAK6 560 aa13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
HNRNPC-225ENST00000556513 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 POLRMTO00411 1230 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 NEFLP07196 543 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 TM4SF1P30408 202 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 NFIXQ14938 502 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
HNRNPC-225ENST00000556513 NUP98P52948 1817 aa13.52□□□□□ -0.25
HNRNPC-225ENST00000556513 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-225ENST00000556513 BABAM1Q9NWV8 329 aa13.52□□□□□ -0.25
HNRNPC-225ENST00000556513 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
HNRNPC-225ENST00000556513 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-225ENST00000556513 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 NBPF26B4DH59 902 aa13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 NBPF15Q8N660 670 aa13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
HNRNPC-225ENST00000556513 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 DPEP1P16444 411 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 TGFB2P61812 414 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
HNRNPC-225ENST00000556513 APAF1O14727 1248 aa13.49□□□□□ -0.25
HNRNPC-225ENST00000556513 GRIN3BO60391 1043 aa13.49□□□□□ -0.25
HNRNPC-225ENST00000556513 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms