RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
SRSF5-214ENST00000556436 PHF14O94880 888 aa17.1■□□□□ 0.33
SRSF5-214ENST00000556436 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
SRSF5-214ENST00000556436 GNAI1P63096 354 aa17.1■□□□□ 0.33
SRSF5-214ENST00000556436 RC3H1Q5TC82 1133 aaKnown RBP17.1■□□□□ 0.33
SRSF5-214ENST00000556436 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
SRSF5-214ENST00000556436 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
SRSF5-214ENST00000556436 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
SRSF5-214ENST00000556436 IL16Q14005 1332 aa17.1■□□□□ 0.33
SRSF5-214ENST00000556436 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
SRSF5-214ENST00000556436 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
SRSF5-214ENST00000556436 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
SRSF5-214ENST00000556436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
SRSF5-214ENST00000556436 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
SRSF5-214ENST00000556436 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
SRSF5-214ENST00000556436 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
SRSF5-214ENST00000556436 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
SRSF5-214ENST00000556436 STARD3NLO95772 234 aa17.07■□□□□ 0.32
SRSF5-214ENST00000556436 A1BGP04217 495 aa17.07■□□□□ 0.32
SRSF5-214ENST00000556436 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
SRSF5-214ENST00000556436 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
SRSF5-214ENST00000556436 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
SRSF5-214ENST00000556436 SSFA2P28290 1259 aa17.06■□□□□ 0.32
SRSF5-214ENST00000556436 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
SRSF5-214ENST00000556436 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
SRSF5-214ENST00000556436 COL15A1P39059 1388 aa17.05■□□□□ 0.32
SRSF5-214ENST00000556436 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
SRSF5-214ENST00000556436 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
SRSF5-214ENST00000556436 RTCBQ9Y3I0 505 aaKnown RBP17.05■□□□□ 0.32
SRSF5-214ENST00000556436 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
SRSF5-214ENST00000556436 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
SRSF5-214ENST00000556436 ZBTB7AO95365 584 aa17.04■□□□□ 0.32
SRSF5-214ENST00000556436 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRSF5-214ENST00000556436 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
SRSF5-214ENST00000556436 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
SRSF5-214ENST00000556436 C8orf58Q8NAV2 365 aa17.04■□□□□ 0.32
SRSF5-214ENST00000556436 LRP5O75197 1615 aa17.03■□□□□ 0.32
SRSF5-214ENST00000556436 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
SRSF5-214ENST00000556436 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
SRSF5-214ENST00000556436 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
SRSF5-214ENST00000556436 MSH5O43196 834 aa17.02■□□□□ 0.32
SRSF5-214ENST00000556436 ADRA2BP18089 450 aa17.02■□□□□ 0.32
SRSF5-214ENST00000556436 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
SRSF5-214ENST00000556436 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
SRSF5-214ENST00000556436 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
SRSF5-214ENST00000556436 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
SRSF5-214ENST00000556436 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.32
SRSF5-214ENST00000556436 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
SRSF5-214ENST00000556436 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
SRSF5-214ENST00000556436 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
SRSF5-214ENST00000556436 PROSER3Q2NL68 480 aa17.01■□□□□ 0.31
SRSF5-214ENST00000556436 MSL1Q68DK7 614 aa17.01■□□□□ 0.31
SRSF5-214ENST00000556436 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
SRSF5-214ENST00000556436 HOXB7P09629 217 aa17■□□□□ 0.31
SRSF5-214ENST00000556436 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
SRSF5-214ENST00000556436 PDIA6Q15084 440 aa17■□□□□ 0.31
SRSF5-214ENST00000556436 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
SRSF5-214ENST00000556436 ZNF330Q9Y3S2 320 aaPredicted RBP17■□□□□ 0.31
SRSF5-214ENST00000556436 ANXA1P04083 346 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
SRSF5-214ENST00000556436 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
SRSF5-214ENST00000556436 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
SRSF5-214ENST00000556436 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
SRSF5-214ENST00000556436 MYL6BP14649 208 aa16.98■□□□□ 0.31
SRSF5-214ENST00000556436 E9PSI1 815 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 GYS1P13807 737 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 RFC4P35249 363 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 PTGER2P43116 358 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
SRSF5-214ENST00000556436 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.31
SRSF5-214ENST00000556436 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
SRSF5-214ENST00000556436 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
SRSF5-214ENST00000556436 NARFQ9UHQ1 456 aa16.96■□□□□ 0.31
SRSF5-214ENST00000556436 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
SRSF5-214ENST00000556436 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.3
SRSF5-214ENST00000556436 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
SRSF5-214ENST00000556436 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
SRSF5-214ENST00000556436 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
SRSF5-214ENST00000556436 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
SRSF5-214ENST00000556436 SPON1Q9HCB6 807 aa16.95■□□□□ 0.3
SRSF5-214ENST00000556436 NUP98P52948 1817 aa16.94■□□□□ 0.3
SRSF5-214ENST00000556436 A0A087WZG4 1122 aa16.94■□□□□ 0.3
SRSF5-214ENST00000556436 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
SRSF5-214ENST00000556436 FKBP8Q14318 412 aa16.94■□□□□ 0.3
SRSF5-214ENST00000556436 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
SRSF5-214ENST00000556436 ZPR1O75312 459 aa16.93■□□□□ 0.3
SRSF5-214ENST00000556436 VAMP4O75379 141 aa16.93■□□□□ 0.3
SRSF5-214ENST00000556436 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
SRSF5-214ENST00000556436 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
SRSF5-214ENST00000556436 AFDNP55196 1824 aaKnown RBP16.92■□□□□ 0.3
SRSF5-214ENST00000556436 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
SRSF5-214ENST00000556436 ARXQ96QS3 562 aa16.92■□□□□ 0.3
SRSF5-214ENST00000556436 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
SRSF5-214ENST00000556436 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms