RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 GPBP1L1Q9HC44 474 aaPredicted RBP28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 ZBTB1Q9Y2K1 713 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 SIPA1L3O60292 1781 aaPredicted RBP28.89■■■□□ 2.22
SDR39U1-216ENST00000556175 NARFQ9UHQ1 456 aa28.89■■■□□ 2.22
SDR39U1-216ENST00000556175 ZNF790Q6PG37 636 aa28.88■■■□□ 2.21
SDR39U1-216ENST00000556175 TEX13AQ9BXU3 409 aaPredicted RBP28.88■■■□□ 2.21
SDR39U1-216ENST00000556175 SENP3-EIF4A1A0A087X0R7 540 aa28.87■■■□□ 2.21
SDR39U1-216ENST00000556175 BRCA1P38398 1863 aaKnown RBP28.87■■■□□ 2.21
SDR39U1-216ENST00000556175 CEMIPQ8WUJ3 1361 aa28.87■■■□□ 2.21
SDR39U1-216ENST00000556175 POLRMTO00411 1230 aaKnown RBP28.86■■■□□ 2.21
SDR39U1-216ENST00000556175 U2AF1L5P0DN76 240 aaPredicted RBP28.86■■■□□ 2.21
SDR39U1-216ENST00000556175 TM4SF1P30408 202 aa28.86■■■□□ 2.21
SDR39U1-216ENST00000556175 U2AF1Q01081 240 aaKnown RBP eCLIP28.86■■■□□ 2.216e-10■■■■□ 25.3
SDR39U1-216ENST00000556175 PHACTR3Q96KR7 559 aa28.86■■■□□ 2.21
SDR39U1-216ENST00000556175 HEG1Q9ULI3 1381 aa28.86■■■□□ 2.21
SDR39U1-216ENST00000556175 FCHSD2O94868 740 aa28.85■■■□□ 2.21
SDR39U1-216ENST00000556175 A0A087WZG4 1122 aa28.84■■■□□ 2.21
SDR39U1-216ENST00000556175 CANXP27824 592 aaKnown RBP28.84■■■□□ 2.21
SDR39U1-216ENST00000556175 ZNF496Q96IT1 587 aaPredicted RBP28.84■■■□□ 2.21
SDR39U1-216ENST00000556175 PIM2Q9P1W9 311 aa28.84■■■□□ 2.21
SDR39U1-216ENST00000556175 FMNL2Q96PY5 1086 aa28.83■■■□□ 2.21
SDR39U1-216ENST00000556175 ARFGEF1Q9Y6D6 1849 aa28.81■■■□□ 2.2
SDR39U1-216ENST00000556175 KCNA3P22001 575 aa28.81■■■□□ 2.2
SDR39U1-216ENST00000556175 ARHGAP27Q6ZUM4 889 aa28.81■■■□□ 2.2
SDR39U1-216ENST00000556175 RTF1Q92541 710 aaKnown RBP28.81■■■□□ 2.2
SDR39U1-216ENST00000556175 BTBD11A6QL63 1104 aa28.8■■■□□ 2.2
SDR39U1-216ENST00000556175 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
SDR39U1-216ENST00000556175 NFIXQ14938 502 aa28.8■■■□□ 2.2
SDR39U1-216ENST00000556175 DALRD3Q5D0E6 543 aaKnown RBP28.8■■■□□ 2.2
SDR39U1-216ENST00000556175 ZNF526Q8TF50 670 aaPredicted RBP28.8■■■□□ 2.2
SDR39U1-216ENST00000556175 NRXN2Q9P2S2 1712 aa28.77■■■□□ 2.2
SDR39U1-216ENST00000556175 NPM2Q86SE8 214 aaKnown RBP28.77■■■□□ 2.2
SDR39U1-216ENST00000556175 BCL2L12Q9HB09 334 aa28.77■■■□□ 2.2
SDR39U1-216ENST00000556175 IL6STP40189 918 aaPredicted RBP28.76■■■□□ 2.19
SDR39U1-216ENST00000556175 AFDNP55196 1824 aaKnown RBP28.76■■■□□ 2.19
SDR39U1-216ENST00000556175 HTATSF1O43719 755 aaKnown RBP28.75■■■□□ 2.19
SDR39U1-216ENST00000556175 SERPINB2P05120 415 aa28.75■■■□□ 2.19
SDR39U1-216ENST00000556175 CHRNA5P30532 468 aa28.75■■■□□ 2.19
SDR39U1-216ENST00000556175 SCN7AQ01118 1682 aa28.74■■■□□ 2.19
SDR39U1-216ENST00000556175 NEFMP07197 916 aa28.74■■■□□ 2.19
SDR39U1-216ENST00000556175 ZNF330Q9Y3S2 320 aaPredicted RBP28.73■■■□□ 2.19
SDR39U1-216ENST00000556175 MCM10Q7L590 875 aa28.72■■■□□ 2.19
SDR39U1-216ENST00000556175 KCNQ3O43525 872 aa28.69■■■□□ 2.18
SDR39U1-216ENST00000556175 BICDL1Q6ZP65 573 aa28.69■■■□□ 2.18
SDR39U1-216ENST00000556175 DLEC1Q9Y238 1755 aa28.68■■■□□ 2.18
SDR39U1-216ENST00000556175 TBC1D2BQ9UPU7 963 aa28.68■■■□□ 2.18
SDR39U1-216ENST00000556175 CARMIL3Q8ND23 1372 aa28.67■■■□□ 2.18
SDR39U1-216ENST00000556175 A1BGP04217 495 aa28.67■■■□□ 2.18
SDR39U1-216ENST00000556175 SNRPA1P09661 255 aaKnown RBP28.67■■■□□ 2.18
SDR39U1-216ENST00000556175 C9orf131Q5VYM1 1079 aa28.67■■■□□ 2.18
SDR39U1-216ENST00000556175 TBC1D9BQ66K14 1250 aa28.66■■■□□ 2.18
SDR39U1-216ENST00000556175 PDZRN3Q9UPQ7 1066 aa28.66■■■□□ 2.18
SDR39U1-216ENST00000556175 H0YIN7 160 aa28.65■■■□□ 2.18
SDR39U1-216ENST00000556175 KIF3CO14782 793 aa28.64■■■□□ 2.18
SDR39U1-216ENST00000556175 DCTN1Q14203 1278 aa28.64■■■□□ 2.18
SDR39U1-216ENST00000556175 C2CD5Q86YS7 1000 aa28.64■■■□□ 2.18
SDR39U1-216ENST00000556175 PNNQ9H307 717 aaKnown RBP28.64■■■□□ 2.18
SDR39U1-216ENST00000556175 USP16Q9Y5T5 823 aa28.64■■■□□ 2.18
SDR39U1-216ENST00000556175 TAF7Q15545 349 aaPredicted RBP28.63■■■□□ 2.17
SDR39U1-216ENST00000556175 DZIP3Q86Y13 1208 aaKnown RBP28.63■■■□□ 2.17
SDR39U1-216ENST00000556175 TTLL6Q8N841 843 aa28.63■■■□□ 2.17
SDR39U1-216ENST00000556175 BCORQ6W2J9 1755 aa28.62■■■□□ 2.17
SDR39U1-216ENST00000556175 CAMTA2O94983 1202 aa28.62■■■□□ 2.17
SDR39U1-216ENST00000556175 SETDB2Q96T68 719 aa28.62■■■□□ 2.17
SDR39U1-216ENST00000556175 PDE6BP35913 854 aa28.61■■■□□ 2.17
SDR39U1-216ENST00000556175 PNISRQ8TF01 805 aaKnown RBP28.61■■■□□ 2.17
SDR39U1-216ENST00000556175 BRIP1Q9BX63 1249 aa28.61■■■□□ 2.17
SDR39U1-216ENST00000556175 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
SDR39U1-216ENST00000556175 NPHP1O15259 732 aa28.59■■■□□ 2.17
SDR39U1-216ENST00000556175 HSPA6P17066 643 aa28.59■■■□□ 2.17
SDR39U1-216ENST00000556175 PRR5LQ6MZQ0 368 aa28.59■■■□□ 2.17
SDR39U1-216ENST00000556175 ZNF652Q9Y2D9 606 aa28.59■■■□□ 2.17
SDR39U1-216ENST00000556175 MAPK8IP3Q9UPT6 1336 aa28.59■■■□□ 2.17
SDR39U1-216ENST00000556175 PRAMEF22A3QJZ6 481 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 CLEC4GQ6UXB4 293 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 CNBD1Q8NA66 436 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 PLEKHF1Q96S99 279 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 DLG5Q8TDM6 1919 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 KDM2BQ8NHM5 1336 aa28.58■■■□□ 2.17
SDR39U1-216ENST00000556175 ANKRD31Q8N7Z5 1873 aa28.57■■■□□ 2.16
SDR39U1-216ENST00000556175 RALBP1Q15311 655 aa28.57■■■□□ 2.16
SDR39U1-216ENST00000556175 NFE2L2Q16236 605 aa28.57■■■□□ 2.16
SDR39U1-216ENST00000556175 ZC3H4Q9UPT8 1303 aaKnown RBP28.57■■■□□ 2.16
SDR39U1-216ENST00000556175 LAMB4A4D0S4 1761 aa28.56■■■□□ 2.16
SDR39U1-216ENST00000556175 RGL2O15211 777 aa28.56■■■□□ 2.16
SDR39U1-216ENST00000556175 TOMM70O94826 608 aa28.56■■■□□ 2.16
SDR39U1-216ENST00000556175 SBF1O95248 1867 aa28.56■■■□□ 2.16
SDR39U1-216ENST00000556175 ST5P78524 1137 aa28.56■■■□□ 2.16
SDR39U1-216ENST00000556175 PIP4K2AP48426 406 aaPredicted RBP28.55■■■□□ 2.16
SDR39U1-216ENST00000556175 CEP350Q5VT06 3117 aa28.55■■■□□ 2.16
SDR39U1-216ENST00000556175 NMRK2Q9NPI5 230 aa28.54■■■□□ 2.16
SDR39U1-216ENST00000556175 KDM3BQ7LBC6 1761 aa28.54■■■□□ 2.16
SDR39U1-216ENST00000556175 LMNB1P20700 586 aa28.53■■■□□ 2.16
SDR39U1-216ENST00000556175 RASSF7Q02833 373 aa28.53■■■□□ 2.16
SDR39U1-216ENST00000556175 ZNF622Q969S3 477 aaKnown RBP eCLIP28.53■■■□□ 2.16
SDR39U1-216ENST00000556175 MIS18AQ9NYP9 233 aa28.52■■■□□ 2.16
SDR39U1-216ENST00000556175 COL11A2P13942 1736 aaPredicted RBP28.52■■■□□ 2.16
SDR39U1-216ENST00000556175 NBPF26B4DH59 902 aa28.51■■■□□ 2.15
SDR39U1-216ENST00000556175 NBPF10Q6P3W6 841 aaKnown RBP28.51■■■□□ 2.15
SDR39U1-216ENST00000556175 C16orf71Q8IYS4 520 aaPredicted RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms