RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
SNX6-206ENST00000556162 TAF1LQ8IZX4 1826 aa18.32■□□□□ 0.52
SNX6-206ENST00000556162 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
SNX6-206ENST00000556162 TJP1Q07157 1748 aa18.32■□□□□ 0.52
SNX6-206ENST00000556162 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
SNX6-206ENST00000556162 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
SNX6-206ENST00000556162 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
SNX6-206ENST00000556162 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 A1BGP04217 495 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 HOXB7P09629 217 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
SNX6-206ENST00000556162 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
SNX6-206ENST00000556162 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
SNX6-206ENST00000556162 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
SNX6-206ENST00000556162 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
SNX6-206ENST00000556162 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
SNX6-206ENST00000556162 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
SNX6-206ENST00000556162 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
SNX6-206ENST00000556162 COL5A3P25940 1745 aaPredicted RBP18.3■□□□□ 0.52
SNX6-206ENST00000556162 SSFA2P28290 1259 aa18.29■□□□□ 0.52
SNX6-206ENST00000556162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
SNX6-206ENST00000556162 PHF14O94880 888 aa18.29■□□□□ 0.52
SNX6-206ENST00000556162 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
SNX6-206ENST00000556162 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
SNX6-206ENST00000556162 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
SNX6-206ENST00000556162 CHMP4AQ9BY43 222 aa18.29■□□□□ 0.52
SNX6-206ENST00000556162 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
SNX6-206ENST00000556162 HDGFL1Q5TGJ6 251 aa18.28■□□□□ 0.52
SNX6-206ENST00000556162 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
SNX6-206ENST00000556162 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
SNX6-206ENST00000556162 MSH5O43196 834 aa18.27■□□□□ 0.52
SNX6-206ENST00000556162 ADRA2BP18089 450 aa18.27■□□□□ 0.52
SNX6-206ENST00000556162 IL6STP40189 918 aaPredicted RBP18.27■□□□□ 0.52
SNX6-206ENST00000556162 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
SNX6-206ENST00000556162 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
SNX6-206ENST00000556162 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
SNX6-206ENST00000556162 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
SNX6-206ENST00000556162 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
SNX6-206ENST00000556162 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
SNX6-206ENST00000556162 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
SNX6-206ENST00000556162 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
SNX6-206ENST00000556162 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
SNX6-206ENST00000556162 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
SNX6-206ENST00000556162 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
SNX6-206ENST00000556162 RFC4P35249 363 aa18.25■□□□□ 0.51
SNX6-206ENST00000556162 EIF5P55010 431 aaKnown RBP18.25■□□□□ 0.51
SNX6-206ENST00000556162 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
SNX6-206ENST00000556162 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
SNX6-206ENST00000556162 ARHGEF1Q92888 912 aaKnown RBP18.25■□□□□ 0.51
SNX6-206ENST00000556162 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
SNX6-206ENST00000556162 A0A087WZG4 1122 aa18.24■□□□□ 0.51
SNX6-206ENST00000556162 MYL6BP14649 208 aa18.24■□□□□ 0.51
SNX6-206ENST00000556162 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
SNX6-206ENST00000556162 PDGFDQ9GZP0 370 aaPredicted RBP18.24■□□□□ 0.51
SNX6-206ENST00000556162 VAMP4O75379 141 aa18.23■□□□□ 0.51
SNX6-206ENST00000556162 ARXQ96QS3 562 aa18.23■□□□□ 0.51
SNX6-206ENST00000556162 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
SNX6-206ENST00000556162 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNX6-206ENST00000556162 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 COL15A1P39059 1388 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 PDIA6Q15084 440 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 SLC16A10Q8TF71 515 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
SNX6-206ENST00000556162 ZPR1O75312 459 aa18.21■□□□□ 0.51
SNX6-206ENST00000556162 ANXA1P04083 346 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
SNX6-206ENST00000556162 QSER1Q2KHR3 1735 aa18.19■□□□□ 0.5
SNX6-206ENST00000556162 TUBGCP6Q96RT7 1819 aa18.19■□□□□ 0.5
SNX6-206ENST00000556162 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
SNX6-206ENST00000556162 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
SNX6-206ENST00000556162 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
SNX6-206ENST00000556162 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
SNX6-206ENST00000556162 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
SNX6-206ENST00000556162 CT47B1P0C2W7 299 aaPredicted RBP18.18■□□□□ 0.5
SNX6-206ENST00000556162 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
SNX6-206ENST00000556162 MTFR1LQ9H019 292 aa18.18■□□□□ 0.5
SNX6-206ENST00000556162 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
SNX6-206ENST00000556162 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
SNX6-206ENST00000556162 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
SNX6-206ENST00000556162 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
SNX6-206ENST00000556162 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 COPS6Q7L5N1 327 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 GYS1P13807 737 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 XAGE3Q8WTP9 111 aa18.16■□□□□ 0.5
SNX6-206ENST00000556162 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SNX6-206ENST00000556162 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
SNX6-206ENST00000556162 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
SNX6-206ENST00000556162 PHAXQ9H814 394 aaKnown RBP18.14■□□□□ 0.49
SNX6-206ENST00000556162 CASZ1Q86V15 1759 aa18.14■□□□□ 0.49
SNX6-206ENST00000556162 SPON1Q9HCB6 807 aa18.14■□□□□ 0.49
SNX6-206ENST00000556162 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms