RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 CEMIPQ8WUJ3 1361 aa22.91■■□□□ 1.26
GPHN-211ENST00000556020 DDR1Q08345 913 aa22.91■■□□□ 1.26
GPHN-211ENST00000556020 MCM10Q7L590 875 aa22.91■■□□□ 1.26
GPHN-211ENST00000556020 RTF1Q92541 710 aaKnown RBP22.91■■□□□ 1.26
GPHN-211ENST00000556020 HEG1Q9ULI3 1381 aa22.9■■□□□ 1.26
GPHN-211ENST00000556020 BTBD11A6QL63 1104 aa22.9■■□□□ 1.26
GPHN-211ENST00000556020 STARD3NLO95772 234 aa22.9■■□□□ 1.26
GPHN-211ENST00000556020 TGFB2P61812 414 aa22.9■■□□□ 1.26
GPHN-211ENST00000556020 KCNQ3O43525 872 aa22.89■■□□□ 1.25
GPHN-211ENST00000556020 DPEP1P16444 411 aa22.89■■□□□ 1.25
GPHN-211ENST00000556020 ZNF330Q9Y3S2 320 aaPredicted RBP22.89■■□□□ 1.25
GPHN-211ENST00000556020 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
GPHN-211ENST00000556020 FMNL2Q96PY5 1086 aa22.88■■□□□ 1.25
GPHN-211ENST00000556020 NARFQ9UHQ1 456 aa22.88■■□□□ 1.25
GPHN-211ENST00000556020 BCS1LQ9Y276 419 aa22.88■■□□□ 1.25
GPHN-211ENST00000556020 NEFMP07197 916 aa22.86■■□□□ 1.25
GPHN-211ENST00000556020 DLG5Q8TDM6 1919 aa22.85■■□□□ 1.25
GPHN-211ENST00000556020 POLRMTO00411 1230 aaKnown RBP22.85■■□□□ 1.25
GPHN-211ENST00000556020 TM4SF1P30408 202 aa22.85■■□□□ 1.25
GPHN-211ENST00000556020 DDX10Q13206 875 aaKnown RBP22.85■■□□□ 1.25
GPHN-211ENST00000556020 TEX13AQ9BXU3 409 aaPredicted RBP22.85■■□□□ 1.25
GPHN-211ENST00000556020 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
GPHN-211ENST00000556020 ATP10DQ9P241 1426 aa22.84■■□□□ 1.25
GPHN-211ENST00000556020 BRCA1P38398 1863 aaKnown RBP22.84■■□□□ 1.25
GPHN-211ENST00000556020 NFIXQ14938 502 aa22.84■■□□□ 1.25
GPHN-211ENST00000556020 EIF5P55010 431 aaKnown RBP22.83■■□□□ 1.25
GPHN-211ENST00000556020 BICDL1Q6ZP65 573 aa22.83■■□□□ 1.25
GPHN-211ENST00000556020 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.25
GPHN-211ENST00000556020 A0A087WZG4 1122 aa22.82■■□□□ 1.24
GPHN-211ENST00000556020 A1BGP04217 495 aa22.82■■□□□ 1.24
GPHN-211ENST00000556020 ZNF526Q8TF50 670 aaPredicted RBP22.82■■□□□ 1.24
GPHN-211ENST00000556020 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
GPHN-211ENST00000556020 CHRNA5P30532 468 aa22.81■■□□□ 1.24
GPHN-211ENST00000556020 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
GPHN-211ENST00000556020 TBC1D2BQ9UPU7 963 aa22.81■■□□□ 1.24
GPHN-211ENST00000556020 PRAMEF22A3QJZ6 481 aa22.8■■□□□ 1.24
GPHN-211ENST00000556020 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
GPHN-211ENST00000556020 ARHGAP27Q6ZUM4 889 aa22.8■■□□□ 1.24
GPHN-211ENST00000556020 SCN7AQ01118 1682 aa22.8■■□□□ 1.24
GPHN-211ENST00000556020 SERPINB2P05120 415 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 KCNA3P22001 575 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 PIP4K2AP48426 406 aaPredicted RBP22.79■■□□□ 1.24
GPHN-211ENST00000556020 RALBP1Q15311 655 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 MIS18AQ9NYP9 233 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 PIM2Q9P1W9 311 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
GPHN-211ENST00000556020 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
GPHN-211ENST00000556020 ARFGEF1Q9Y6D6 1849 aa22.78■■□□□ 1.24
GPHN-211ENST00000556020 ADCY9O60503 1353 aa22.77■■□□□ 1.24
GPHN-211ENST00000556020 NRXN2Q9P2S2 1712 aa22.77■■□□□ 1.24
GPHN-211ENST00000556020 C1QTNF8P60827 252 aa22.77■■□□□ 1.24
GPHN-211ENST00000556020 TAF7Q15545 349 aaPredicted RBP22.77■■□□□ 1.24
GPHN-211ENST00000556020 DALRD3Q5D0E6 543 aaKnown RBP22.77■■□□□ 1.24
GPHN-211ENST00000556020 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
GPHN-211ENST00000556020 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
GPHN-211ENST00000556020 TBC1D9BQ66K14 1250 aa22.76■■□□□ 1.23
GPHN-211ENST00000556020 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
GPHN-211ENST00000556020 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
GPHN-211ENST00000556020 THUMPD2Q9BTF0 503 aaKnown RBP22.75■■□□□ 1.23
GPHN-211ENST00000556020 PNNQ9H307 717 aaKnown RBP22.74■■□□□ 1.23
GPHN-211ENST00000556020 DZIP3Q86Y13 1208 aaKnown RBP22.73■■□□□ 1.23
GPHN-211ENST00000556020 CARMIL3Q8ND23 1372 aa22.73■■□□□ 1.23
GPHN-211ENST00000556020 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
GPHN-211ENST00000556020 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
GPHN-211ENST00000556020 CCDC24Q8N4L8 307 aa22.72■■□□□ 1.23
GPHN-211ENST00000556020 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
GPHN-211ENST00000556020 CAMTA2O94983 1202 aa22.71■■□□□ 1.23
GPHN-211ENST00000556020 C2CD5Q86YS7 1000 aa22.71■■□□□ 1.23
GPHN-211ENST00000556020 MYBBP1AQ9BQG0 1328 aaKnown RBP22.71■■□□□ 1.23
GPHN-211ENST00000556020 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
GPHN-211ENST00000556020 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
GPHN-211ENST00000556020 NPHP1O15259 732 aa22.7■■□□□ 1.22
GPHN-211ENST00000556020 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
GPHN-211ENST00000556020 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
GPHN-211ENST00000556020 SETDB2Q96T68 719 aa22.69■■□□□ 1.22
GPHN-211ENST00000556020 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
GPHN-211ENST00000556020 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
GPHN-211ENST00000556020 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
GPHN-211ENST00000556020 H0YIN7 160 aa22.67■■□□□ 1.22
GPHN-211ENST00000556020 PRR5LQ6MZQ0 368 aa22.67■■□□□ 1.22
GPHN-211ENST00000556020 RIPK4P57078 832 aa22.66■■□□□ 1.22
GPHN-211ENST00000556020 C9orf131Q5VYM1 1079 aa22.66■■□□□ 1.22
GPHN-211ENST00000556020 CCDC146Q8IYE0 955 aa22.66■■□□□ 1.22
GPHN-211ENST00000556020 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
GPHN-211ENST00000556020 CNBD1Q8NA66 436 aa22.65■■□□□ 1.22
GPHN-211ENST00000556020 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
GPHN-211ENST00000556020 EIF4A1P60842 406 aaKnown RBP22.64■■□□□ 1.21
GPHN-211ENST00000556020 TTLL6Q8N841 843 aa22.64■■□□□ 1.21
GPHN-211ENST00000556020 ZNF622Q969S3 477 aaKnown RBP eCLIP22.64■■□□□ 1.217e-7■■■□□ 14.8
GPHN-211ENST00000556020 ZNF652Q9Y2D9 606 aa22.64■■□□□ 1.21
GPHN-211ENST00000556020 RRP7AQ9Y3A4 280 aaKnown RBP22.64■■□□□ 1.21
GPHN-211ENST00000556020 PDE6BP35913 854 aa22.63■■□□□ 1.21
GPHN-211ENST00000556020 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
GPHN-211ENST00000556020 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
GPHN-211ENST00000556020 BRIP1Q9BX63 1249 aa22.63■■□□□ 1.21
GPHN-211ENST00000556020 RNF181Q9P0P0 153 aa22.63■■□□□ 1.21
GPHN-211ENST00000556020 SBF1O95248 1867 aa22.62■■□□□ 1.21
GPHN-211ENST00000556020 TMPOP42166 694 aaKnown RBP22.62■■□□□ 1.21
GPHN-211ENST00000556020 ST5P78524 1137 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms