RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 CEP350Q5VT06 3117 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 PPP2R1AP30153 589 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 CNGB1Q14028 1251 aaPredicted RBP12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 ZBTB1Q9Y2K1 713 aa12.05□□□□□ -0.48
AC004828.1-201ENST00000555303 A0A087WZG4 1122 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 FCHSD2O94868 740 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 TM4SF1P30408 202 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 DDR1Q08345 913 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 IL17REQ8NFR9 667 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
AC004828.1-201ENST00000555303 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
AC004828.1-201ENST00000555303 DPEP1P16444 411 aa12.03□□□□□ -0.48
AC004828.1-201ENST00000555303 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
AC004828.1-201ENST00000555303 PIM2Q9P1W9 311 aa12.03□□□□□ -0.48
AC004828.1-201ENST00000555303 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 KCNA3P22001 575 aa12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
AC004828.1-201ENST00000555303 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
AC004828.1-201ENST00000555303 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
AC004828.1-201ENST00000555303 DALRD3Q5D0E6 543 aaKnown RBP12.01□□□□□ -0.49
AC004828.1-201ENST00000555303 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
AC004828.1-201ENST00000555303 SBF1O95248 1867 aa12.01□□□□□ -0.49
AC004828.1-201ENST00000555303 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
AC004828.1-201ENST00000555303 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
AC004828.1-201ENST00000555303 NEFMP07197 916 aa12□□□□□ -0.49
AC004828.1-201ENST00000555303 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
AC004828.1-201ENST00000555303 NFIXQ14938 502 aa12□□□□□ -0.49
AC004828.1-201ENST00000555303 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
AC004828.1-201ENST00000555303 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
AC004828.1-201ENST00000555303 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
AC004828.1-201ENST00000555303 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
AC004828.1-201ENST00000555303 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
AC004828.1-201ENST00000555303 CARMIL3Q8ND23 1372 aa11.99□□□□□ -0.49
AC004828.1-201ENST00000555303 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
AC004828.1-201ENST00000555303 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
AC004828.1-201ENST00000555303 SERPINB2P05120 415 aa11.98□□□□□ -0.49
AC004828.1-201ENST00000555303 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 RGL2O15211 777 aa11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 CHRNA5P30532 468 aa11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 PNNQ9H307 717 aaKnown RBP11.97□□□□□ -0.49
AC004828.1-201ENST00000555303 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.49
AC004828.1-201ENST00000555303 MCM10Q7L590 875 aa11.96□□□□□ -0.49
AC004828.1-201ENST00000555303 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
AC004828.1-201ENST00000555303 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
AC004828.1-201ENST00000555303 TTLL6Q8N841 843 aa11.95□□□□□ -0.5
AC004828.1-201ENST00000555303 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
AC004828.1-201ENST00000555303 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
AC004828.1-201ENST00000555303 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 CACNA1SQ13698 1873 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 CCDC88AQ3V6T2 1871 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 H0YIN7 160 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 KIF3CO14782 793 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 KCNQ3O43525 872 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 CAMTA2O94983 1202 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 A1BGP04217 495 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 PDE6BP35913 854 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 RALBP1Q15311 655 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 C9orf131Q5VYM1 1079 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 TBC1D9BQ66K14 1250 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 TBC1D2BQ9UPU7 963 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 ZNF652Q9Y2D9 606 aa11.94□□□□□ -0.5
AC004828.1-201ENST00000555303 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 HSPA6P17066 643 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 BICDL1Q6ZP65 573 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 C2CD5Q86YS7 1000 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 PLEKHF1Q96S99 279 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 RNF181Q9P0P0 153 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
AC004828.1-201ENST00000555303 TOMM70O94826 608 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 LMNB1P20700 586 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 ST5P78524 1137 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
AC004828.1-201ENST00000555303 NUP98P52948 1817 aa11.91□□□□□ -0.5
AC004828.1-201ENST00000555303 NPHP1O15259 732 aa11.91□□□□□ -0.5
AC004828.1-201ENST00000555303 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms