RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 PLSCR1O15162 318 aa12.85□□□□□ -0.35
CCNK-204ENST00000555049 FCHSD2O94868 740 aa12.85□□□□□ -0.35
CCNK-204ENST00000555049 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
CCNK-204ENST00000555049 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
CCNK-204ENST00000555049 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
CCNK-204ENST00000555049 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
CCNK-204ENST00000555049 BTAF1O14981 1849 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 RGS3P49796 1198 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 PIGBQ92521 554 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
CCNK-204ENST00000555049 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
CCNK-204ENST00000555049 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
CCNK-204ENST00000555049 PANK2Q9BZ23 570 aa12.83□□□□□ -0.36
CCNK-204ENST00000555049 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
CCNK-204ENST00000555049 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
CCNK-204ENST00000555049 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
CCNK-204ENST00000555049 RREB1Q92766 1687 aa12.82□□□□□ -0.36
CCNK-204ENST00000555049 TRAK2O60296 914 aa12.81□□□□□ -0.36
CCNK-204ENST00000555049 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
CCNK-204ENST00000555049 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
CCNK-204ENST00000555049 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 KCNQ4P56696 695 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 UPF2Q9HAU5 1272 aaKnown RBP12.8□□□□□ -0.36
CCNK-204ENST00000555049 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 CHMP5Q9NZZ3 219 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 ITGB4P16144 1822 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
CCNK-204ENST00000555049 DMTNQ08495 405 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
CCNK-204ENST00000555049 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
CCNK-204ENST00000555049 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
CCNK-204ENST00000555049 CABP4P57796 275 aa12.79□□□□□ -0.36
CCNK-204ENST00000555049 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
CCNK-204ENST00000555049 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
CCNK-204ENST00000555049 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
CCNK-204ENST00000555049 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 KIF20AO95235 890 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 RIPK4P57078 832 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCNK-204ENST00000555049 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
CCNK-204ENST00000555049 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
CCNK-204ENST00000555049 TAF7LQ5H9L4 462 aa12.77□□□□□ -0.36
CCNK-204ENST00000555049 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.36
CCNK-204ENST00000555049 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.36
CCNK-204ENST00000555049 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
CCNK-204ENST00000555049 MRC1P22897 1456 aa12.77□□□□□ -0.37
CCNK-204ENST00000555049 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCNK-204ENST00000555049 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
CCNK-204ENST00000555049 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.37
CCNK-204ENST00000555049 LY75O60449 1722 aa12.76□□□□□ -0.37
CCNK-204ENST00000555049 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
CCNK-204ENST00000555049 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CCNK-204ENST00000555049 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
CCNK-204ENST00000555049 MCM10Q7L590 875 aa12.76□□□□□ -0.37
CCNK-204ENST00000555049 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
CCNK-204ENST00000555049 MSNP26038 577 aaKnown RBP12.75□□□□□ -0.37
CCNK-204ENST00000555049 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
CCNK-204ENST00000555049 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
CCNK-204ENST00000555049 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
CCNK-204ENST00000555049 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
CCNK-204ENST00000555049 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
CCNK-204ENST00000555049 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
CCNK-204ENST00000555049 SLKQ9H2G2 1235 aaPredicted RBP12.75□□□□□ -0.37
CCNK-204ENST00000555049 PAPPAQ13219 1627 aa12.75□□□□□ -0.37
CCNK-204ENST00000555049 ZNF500O60304 480 aaPredicted RBP12.74□□□□□ -0.37
CCNK-204ENST00000555049 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
CCNK-204ENST00000555049 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
CCNK-204ENST00000555049 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
CCNK-204ENST00000555049 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
CCNK-204ENST00000555049 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 MCM5P33992 734 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 SIK1P57059 783 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 PLIN1O60240 522 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 ITPK1Q13572 414 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
CCNK-204ENST00000555049 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
CCNK-204ENST00000555049 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
CCNK-204ENST00000555049 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms