RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SIRT1Q96EB6 747 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 ESYT1Q9BSJ8 1104 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 CHIC2Q9UKJ5 165 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 WASLO00401 505 aaPredicted RBP6.87□□□□□ -1.31
VTI1B-203ENST00000554636 GDF10P55107 478 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 NCOA4Q13772 614 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 TLR1Q15399 786 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 EML3Q32P44 896 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 ESCO1Q5FWF5 840 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
VTI1B-203ENST00000554636 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
VTI1B-203ENST00000554636 NBPF15Q8N660 670 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
VTI1B-203ENST00000554636 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 SERTAD1Q9UHV2 236 aa6.87□□□□□ -1.31
VTI1B-203ENST00000554636 ATP10BO94823 1461 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 USP17L5A8MUK1 530 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
VTI1B-203ENST00000554636 SCNN1DP51172 638 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 PSME1Q06323 249 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 SV2AQ7L0J3 742 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 GPAMQ9HCL2 828 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
VTI1B-203ENST00000554636 NUP153P49790 1475 aaKnown RBP6.85□□□□□ -1.31
VTI1B-203ENST00000554636 CFAP43Q8NDM7 1665 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 GPR25O00155 361 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 KRT76Q01546 638 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 GNASQ5JWF2 1037 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 ZSCAN1Q8NBB4 408 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 GLMNQ92990 594 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 XAGE2Q96GT9 111 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
VTI1B-203ENST00000554636 HRH3Q9Y5N1 445 aa6.85□□□□□ -1.31
VTI1B-203ENST00000554636 GTF2IP78347 998 aa6.84□□□□□ -1.31
VTI1B-203ENST00000554636 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
VTI1B-203ENST00000554636 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
VTI1B-203ENST00000554636 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
VTI1B-203ENST00000554636 MAGI3Q5TCQ9 1506 aa6.84□□□□□ -1.31
VTI1B-203ENST00000554636 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
VTI1B-203ENST00000554636 ARHGAP35Q9NRY4 1499 aa6.84□□□□□ -1.31
VTI1B-203ENST00000554636 COL17A1Q9UMD9 1497 aaPredicted RBP6.84□□□□□ -1.31
VTI1B-203ENST00000554636 ARID3CA6NKF2 412 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 SPATA31C2B4DYI2 1134 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 INHAP05111 366 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 C4orf17Q53FE4 359 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 FNBP4Q8N3X1 1017 aaPredicted RBP6.83□□□□□ -1.32
VTI1B-203ENST00000554636 ZNF837Q96EG3 531 aaPredicted RBP6.83□□□□□ -1.32
VTI1B-203ENST00000554636 DYRK1BQ9Y463 629 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 ABCA9Q8IUA7 1624 aa6.83□□□□□ -1.32
VTI1B-203ENST00000554636 USP17L3A6NCW0 530 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 USP17L4A6NCW7 530 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 TMEM229AB2RXF0 380 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 RANGAP1P46060 587 aaPredicted RBP6.82□□□□□ -1.32
VTI1B-203ENST00000554636 PLA2G4AP47712 749 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 USP17L1Q7RTZ2 530 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
VTI1B-203ENST00000554636 STK17AQ9UEE5 414 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 PCDHGA11Q9Y5H2 935 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 CD109Q6YHK3 1445 aa6.82□□□□□ -1.32
VTI1B-203ENST00000554636 ATP9BO43861 1147 aa6.81□□□□□ -1.32
VTI1B-203ENST00000554636 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
VTI1B-203ENST00000554636 DBN1Q16643 649 aa6.81□□□□□ -1.32
VTI1B-203ENST00000554636 TRIM22Q8IYM9 498 aa6.81□□□□□ -1.32
VTI1B-203ENST00000554636 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
VTI1B-203ENST00000554636 RHBDD1Q8TEB9 315 aa6.81□□□□□ -1.32
VTI1B-203ENST00000554636 CALR3Q96L12 384 aaKnown RBP6.81□□□□□ -1.32
VTI1B-203ENST00000554636 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
VTI1B-203ENST00000554636 CDK13Q14004 1512 aaKnown RBP6.81□□□□□ -1.32
VTI1B-203ENST00000554636 F11P03951 625 aa6.8□□□□□ -1.32
VTI1B-203ENST00000554636 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
VTI1B-203ENST00000554636 USP3Q9Y6I4 520 aa6.8□□□□□ -1.32
VTI1B-203ENST00000554636 HECW1Q76N89 1606 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 FMN1Q68DA7 1419 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 A0A1B0GTH6 734 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 A6NJR5 290 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 SMTNP53814 917 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 GAS6Q14393 721 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 FOXR1Q6PIV2 292 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 PPARGC1BQ86YN6 1023 aaKnown RBP6.79□□□□□ -1.32
VTI1B-203ENST00000554636 TPCN2Q8NHX9 752 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 AIDAQ96BJ3 306 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
VTI1B-203ENST00000554636 ZNF358Q9NW07 568 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
VTI1B-203ENST00000554636 LRRIQ1Q96JM4 1722 aa6.79□□□□□ -1.32
VTI1B-203ENST00000554636 H7C1W4 665 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 LZTS3O60299 673 aaPredicted RBP6.78□□□□□ -1.32
VTI1B-203ENST00000554636 MSX1P28360 303 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 CLDN10P78369 228 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 WDR44Q5JSH3 913 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 TBCELQ5QJ74 424 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 ZNF594Q96JF6 807 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms