RNA–Protein interactions for RNA: ENST00000554252.1

AL390816.2-201, humanhuman

TSL 3 BASIC

Gene AL390816.2, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.2-201ENST00000554252 SLC16A10Q8TF71 515 aa27.64■■■□□ 2.02
AL390816.2-201ENST00000554252 SNRPA1P09661 255 aaKnown RBP27.63■■■□□ 2.01
AL390816.2-201ENST00000554252 YY1P25490 414 aa27.62■■■□□ 2.01
AL390816.2-201ENST00000554252 SMIM5Q71RC9 77 aa27.62■■■□□ 2.01
AL390816.2-201ENST00000554252 VSIG10Q8N0Z9 540 aa27.62■■■□□ 2.01
AL390816.2-201ENST00000554252 FANCIQ9NVI1 1328 aa27.62■■■□□ 2.01
AL390816.2-201ENST00000554252 HMGB2P26583 209 aaKnown RBP27.61■■■□□ 2.01
AL390816.2-201ENST00000554252 AK7Q96M32 723 aa27.61■■■□□ 2.01
AL390816.2-201ENST00000554252 TEX13AQ9BXU3 409 aaPredicted RBP27.61■■■□□ 2.01
AL390816.2-201ENST00000554252 TAF1LQ8IZX4 1826 aa27.61■■■□□ 2.01
AL390816.2-201ENST00000554252 HEG1Q9ULI3 1381 aa27.6■■■□□ 2.01
AL390816.2-201ENST00000554252 ELL2O00472 640 aaPredicted RBP27.6■■■□□ 2.01
AL390816.2-201ENST00000554252 PHF14O94880 888 aa27.6■■■□□ 2.01
AL390816.2-201ENST00000554252 SLC4A9Q96Q91 983 aa27.6■■■□□ 2.01
AL390816.2-201ENST00000554252 KRT24Q2M2I5 525 aa27.59■■■□□ 2.01
AL390816.2-201ENST00000554252 DNAJC10Q8IXB1 793 aa27.59■■■□□ 2.01
AL390816.2-201ENST00000554252 C4BP0C0L5 1744 aa27.58■■■□□ 2.01
AL390816.2-201ENST00000554252 GIGYF1O75420 1035 aaPredicted RBP27.58■■■□□ 2.01
AL390816.2-201ENST00000554252 EXOSC9Q06265 439 aaKnown RBP27.58■■■□□ 2.01
AL390816.2-201ENST00000554252 DUSP27Q5VZP5 1158 aa27.58■■■□□ 2.01
AL390816.2-201ENST00000554252 VIRMAQ69YN4 1812 aaKnown RBP27.57■■■□□ 2
AL390816.2-201ENST00000554252 STARD3NLO95772 234 aa27.57■■■□□ 2
AL390816.2-201ENST00000554252 ITPK1Q13572 414 aa27.57■■■□□ 2
AL390816.2-201ENST00000554252 C8orf58Q8NAV2 365 aa27.57■■■□□ 2
AL390816.2-201ENST00000554252 AMIGO3Q86WK7 504 aa27.56■■■□□ 2
AL390816.2-201ENST00000554252 LINC00116Q8NCU8 138 aa27.56■■■□□ 2
AL390816.2-201ENST00000554252 SIPA1L3O60292 1781 aaPredicted RBP27.55■■■□□ 2
AL390816.2-201ENST00000554252 PRAMEF22A3QJZ6 481 aa27.55■■■□□ 2
AL390816.2-201ENST00000554252 EIF2S2P20042 333 aaKnown RBP27.55■■■□□ 2
AL390816.2-201ENST00000554252 USP16Q9Y5T5 823 aa27.55■■■□□ 2
AL390816.2-201ENST00000554252 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
AL390816.2-201ENST00000554252 TRMT2AQ8IZ69 625 aaKnown RBP27.54■■■□□ 2
AL390816.2-201ENST00000554252 PELP1Q8IZL8 1130 aaKnown RBP27.54■■■□□ 2
AL390816.2-201ENST00000554252 TWISTNBQ3B726 338 aaPredicted RBP27.53■■■□□ 2
AL390816.2-201ENST00000554252 TSPYL6Q8N831 410 aa27.52■■■□□ 2
AL390816.2-201ENST00000554252 COL24A1Q17RW2 1714 aa27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 HOXB7P09629 217 aa27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 CYP19A1P11511 503 aaPredicted RBP27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 FLAD1Q8NFF5 587 aa27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 NECTIN2Q92692 538 aa27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 CHMP4AQ9BY43 222 aa27.51■■□□□ 1.99
AL390816.2-201ENST00000554252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
AL390816.2-201ENST00000554252 NLGN2Q8NFZ4 835 aa27.5■■□□□ 1.99
AL390816.2-201ENST00000554252 GNPATO15228 680 aa27.49■■□□□ 1.99
AL390816.2-201ENST00000554252 CRKLP46109 303 aaKnown RBP27.49■■□□□ 1.99
AL390816.2-201ENST00000554252 GPR162Q16538 588 aa27.49■■□□□ 1.99
AL390816.2-201ENST00000554252 HDGFL1Q5TGJ6 251 aa27.49■■□□□ 1.99
AL390816.2-201ENST00000554252 SOS1Q07889 1333 aaPredicted RBP27.48■■□□□ 1.99
AL390816.2-201ENST00000554252 A1BGP04217 495 aa27.48■■□□□ 1.99
AL390816.2-201ENST00000554252 CCDC87Q9NVE4 849 aa27.48■■□□□ 1.99
AL390816.2-201ENST00000554252 KDM3BQ7LBC6 1761 aa27.48■■□□□ 1.99
AL390816.2-201ENST00000554252 UBR3Q6ZT12 1888 aa27.47■■□□□ 1.99
AL390816.2-201ENST00000554252 CANXP27824 592 aaKnown RBP27.47■■□□□ 1.99
AL390816.2-201ENST00000554252 RC3H1Q5TC82 1133 aaKnown RBP27.47■■□□□ 1.99
AL390816.2-201ENST00000554252 VAMP4O75379 141 aa27.46■■□□□ 1.99
AL390816.2-201ENST00000554252 NPM2Q86SE8 214 aaKnown RBP27.46■■□□□ 1.99
AL390816.2-201ENST00000554252 CCDC30Q5VVM6 783 aa27.45■■□□□ 1.98
AL390816.2-201ENST00000554252 INTS5Q6P9B9 1019 aaKnown RBP27.44■■□□□ 1.98
AL390816.2-201ENST00000554252 CNTNAP4Q9C0A0 1308 aa27.43■■□□□ 1.98
AL390816.2-201ENST00000554252 ZNF330Q9Y3S2 320 aaPredicted RBP27.43■■□□□ 1.98
AL390816.2-201ENST00000554252 TCERG1O14776 1098 aaKnown RBP27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 SSFA2P28290 1259 aa27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 PIP4K2AP48426 406 aaPredicted RBP27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 STK31Q9BXU1 1019 aa27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 ZBTB1Q9Y2K1 713 aa27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 RTCBQ9Y3I0 505 aaKnown RBP27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 UBR2Q8IWV8 1755 aa27.42■■□□□ 1.98
AL390816.2-201ENST00000554252 RPS6KA4O75676 772 aa27.41■■□□□ 1.98
AL390816.2-201ENST00000554252 CT47B1P0C2W7 299 aaPredicted RBP27.41■■□□□ 1.98
AL390816.2-201ENST00000554252 MYL6BP14649 208 aa27.41■■□□□ 1.98
AL390816.2-201ENST00000554252 DBF4Q9UBU7 674 aaPredicted RBP27.4■■□□□ 1.98
AL390816.2-201ENST00000554252 CHPF2Q9P2E5 772 aa27.39■■□□□ 1.98
AL390816.2-201ENST00000554252 ERBB4Q15303 1308 aa27.39■■□□□ 1.97
AL390816.2-201ENST00000554252 NBPF26B4DH59 902 aa27.38■■□□□ 1.97
AL390816.2-201ENST00000554252 NBPF10Q6P3W6 841 aaKnown RBP27.38■■□□□ 1.97
AL390816.2-201ENST00000554252 NBPF15Q8N660 670 aa27.38■■□□□ 1.97
AL390816.2-201ENST00000554252 DDX21Q9NR30 783 aaKnown RBP eCLIP27.38■■□□□ 1.97
AL390816.2-201ENST00000554252 ANXA1P04083 346 aa27.37■■□□□ 1.97
AL390816.2-201ENST00000554252 IL6STP40189 918 aaPredicted RBP27.37■■□□□ 1.97
AL390816.2-201ENST00000554252 TRAPPC3LQ5T215 181 aa27.37■■□□□ 1.97
AL390816.2-201ENST00000554252 UTRNP46939 3433 aa27.37■■□□□ 1.97
AL390816.2-201ENST00000554252 ZNF428Q96B54 188 aa27.36■■□□□ 1.97
AL390816.2-201ENST00000554252 WWC3Q9ULE0 1092 aa27.36■■□□□ 1.97
AL390816.2-201ENST00000554252 SLC4A2P04920 1241 aa27.35■■□□□ 1.97
AL390816.2-201ENST00000554252 PDIA6Q15084 440 aa27.35■■□□□ 1.97
AL390816.2-201ENST00000554252 HYPKQ9NX55 129 aa27.35■■□□□ 1.97
AL390816.2-201ENST00000554252 A0A087WZG4 1122 aa27.34■■□□□ 1.97
AL390816.2-201ENST00000554252 EIF5P55010 431 aaKnown RBP27.34■■□□□ 1.97
AL390816.2-201ENST00000554252 PROSER3Q2NL68 480 aa27.34■■□□□ 1.97
AL390816.2-201ENST00000554252 ZNF831Q5JPB2 1677 aa27.33■■□□□ 1.97
AL390816.2-201ENST00000554252 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
AL390816.2-201ENST00000554252 AIMP1Q12904 312 aaKnown RBP27.33■■□□□ 1.97
AL390816.2-201ENST00000554252 TJP1Q07157 1748 aa27.33■■□□□ 1.96
AL390816.2-201ENST00000554252 YBX3P16989 372 aaKnown RBP eCLIP27.32■■□□□ 1.96
AL390816.2-201ENST00000554252 ADRA2BP18089 450 aa27.32■■□□□ 1.96
AL390816.2-201ENST00000554252 RFC4P35249 363 aa27.32■■□□□ 1.96
AL390816.2-201ENST00000554252 ALDH1L2Q3SY69 923 aa27.31■■□□□ 1.96
AL390816.2-201ENST00000554252 SSH1Q8WYL5 1049 aa27.31■■□□□ 1.96
AL390816.2-201ENST00000554252 ARHGEF1Q92888 912 aaKnown RBP27.31■■□□□ 1.96
AL390816.2-201ENST00000554252 SMC4Q9NTJ3 1288 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms