RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 OVOS2A0A0J9YW53 1432 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CRB1P82279 1406 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 OVOS2Q6IE36 1432 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 KIAA0100Q14667 2235 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DPEP1P16444 411 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ITPK1Q13572 414 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 AMOTQ4VCS5 1084 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 HDGFL1Q5TGJ6 251 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DPY19L2Q6NUT2 758 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 OLFM4Q6UX06 510 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 BARGINQ6ZT62 677 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 NLGN1Q8N2Q7 840 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CNBD1Q8NA66 436 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 GAS2L2Q8NHY3 880 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 JDP2Q8WYK2 163 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 TSR2Q969E8 191 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DCAF5Q96JK2 942 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 STK31Q9BXU1 1019 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 BMP2KQ9NSY1 1161 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ABT1Q9ULW3 272 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FLT4P35916 1363 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 MROH1Q8NDA8 1641 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 KIF1BO60333 1816 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 TMEM131LA2VDJ0 1609 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FKBP5Q13451 457 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 WASHC2AQ641Q2 1341 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 IGSF1Q8N6C5 1336 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CHMP4CQ96CF2 233 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FMNL2Q96PY5 1086 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ATG3Q9NT62 314 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 MKRN1Q9UHC7 482 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 IQSEC3Q9UPP2 1182 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 SETD1AO15047 1707 aaKnown RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 SERPINB2P05120 415 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RASSF7Q02833 373 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 DALRD3Q5D0E6 543 aaKnown RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 C9orf131Q5VYM1 1079 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 LARGE2Q8N3Y3 721 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF784Q8NCA9 323 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 LINC00116Q8NCU8 138 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 BEGAINQ9BUH8 593 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RRAGCQ9HB90 399 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 NMRK2Q9NPI5 230 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 CACNA1GO43497 2377 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 REREQ9P2R6 1566 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 NEXMIFQ5QGS0 1516 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PTCH1Q13635 1447 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 CCDC7Q96M83 1385 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RAD21O60216 631 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PPP2R1AP30153 589 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ST5P78524 1137 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 OS9Q13438 667 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 VPS37DQ86XT2 251 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF277Q9NRM2 450 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PIM2Q9P1W9 311 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 TSKSQ9UJT2 592 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ADAMTS8Q9UP79 889 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 DIP2AQ14689 1571 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 AATKQ6ZMQ8 1374 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PLSCR1O15162 318 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 RNMTO43148 476 aaKnown RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 GRIN3BO60391 1043 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 RAD17O75943 681 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 SEC24BO95487 1268 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 DIEXFQ68CQ4 756 aaKnown RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF790Q6PG37 636 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 TPTE2Q6XPS3 522 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 COPS6Q7L5N1 327 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 HELBQ8NG08 1087 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 FAM89AQ96GI7 184 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 GPR101Q96P66 508 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 CROCC2H7BZ55 1655 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 POLR3AO14802 1390 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 PDIA4P13667 645 aaKnown RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 AMIGO3Q86WK7 504 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 HS3ST6Q96QI5 342 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 C9orf78Q9NZ63 289 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 COLQQ9Y215 455 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 ZNF652Q9Y2D9 606 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 DCCP43146 1447 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 ANKRD36BQ8N2N9 1353 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A3P48751 1232 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 NEXNQ0ZGT2 675 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 CHAF1AQ13111 956 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 TAF7Q15545 349 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 DOK7Q18PE1 504 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 AKAP4Q5JQC9 854 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 TTLL7Q6ZT98 887 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 SYNE4Q8N205 404 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 FLAD1Q8NFF5 587 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 PNNQ9H307 717 aaKnown RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 POLR1AO95602 1720 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 NCOA3Q9Y6Q9 1424 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SBNO2Q9Y2G9 1366 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 STRCP1A6NGW2 1772 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 LMTK2Q8IWU2 1503 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SPHKAPQ2M3C7 1700 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms