RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 ITGB4P16144 1822 aa13.02□□□□□ -0.33
PSMC1-203ENST00000553835 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.33
PSMC1-203ENST00000553835 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
PSMC1-203ENST00000553835 HPS5Q9UPZ3 1129 aa13.01□□□□□ -0.33
PSMC1-203ENST00000553835 TONSLQ96HA7 1378 aa13.01□□□□□ -0.33
PSMC1-203ENST00000553835 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
PSMC1-203ENST00000553835 EPHX2P34913 555 aa13□□□□□ -0.33
PSMC1-203ENST00000553835 RFC4P35249 363 aa13□□□□□ -0.33
PSMC1-203ENST00000553835 ATP6V1AP38606 617 aa13□□□□□ -0.33
PSMC1-203ENST00000553835 FKBP8Q14318 412 aa13□□□□□ -0.33
PSMC1-203ENST00000553835 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
PSMC1-203ENST00000553835 BRCA2P51587 3418 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 KDRP35968 1356 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 PAXIP1Q6ZW49 1069 aaPredicted RBP12.99□□□□□ -0.33
PSMC1-203ENST00000553835 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
PSMC1-203ENST00000553835 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
PSMC1-203ENST00000553835 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 CYP27B1O15528 508 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
PSMC1-203ENST00000553835 GRM1Q13255 1194 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
PSMC1-203ENST00000553835 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
PSMC1-203ENST00000553835 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
PSMC1-203ENST00000553835 VCANP13611 3396 aa12.97□□□□□ -0.33
PSMC1-203ENST00000553835 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.33
PSMC1-203ENST00000553835 SLC4A9Q96Q91 983 aa12.96□□□□□ -0.33
PSMC1-203ENST00000553835 ASAP1Q9ULH1 1129 aa12.96□□□□□ -0.33
PSMC1-203ENST00000553835 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
PSMC1-203ENST00000553835 SPTBN5Q9NRC6 3674 aaKnown RBP12.95□□□□□ -0.34
PSMC1-203ENST00000553835 TRPM7Q96QT4 1865 aa12.94□□□□□ -0.34
PSMC1-203ENST00000553835 PKN2Q16513 984 aaKnown RBP12.94□□□□□ -0.34
PSMC1-203ENST00000553835 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
PSMC1-203ENST00000553835 ZIC5Q96T25 663 aa12.94□□□□□ -0.34
PSMC1-203ENST00000553835 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
PSMC1-203ENST00000553835 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
PSMC1-203ENST00000553835 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
PSMC1-203ENST00000553835 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
PSMC1-203ENST00000553835 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
PSMC1-203ENST00000553835 CENPJQ9HC77 1338 aaPredicted RBP12.92□□□□□ -0.34
PSMC1-203ENST00000553835 NOGQ13253 232 aa12.92□□□□□ -0.34
PSMC1-203ENST00000553835 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
PSMC1-203ENST00000553835 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
PSMC1-203ENST00000553835 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
PSMC1-203ENST00000553835 KTN1Q86UP2 1357 aaKnown RBP12.92□□□□□ -0.34
PSMC1-203ENST00000553835 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
PSMC1-203ENST00000553835 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 C21orf2O43822 256 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 NME9Q86XW9 330 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
PSMC1-203ENST00000553835 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
PSMC1-203ENST00000553835 HOXC9P31274 260 aa12.9□□□□□ -0.34
PSMC1-203ENST00000553835 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
PSMC1-203ENST00000553835 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
PSMC1-203ENST00000553835 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
PSMC1-203ENST00000553835 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
PSMC1-203ENST00000553835 H0YIN7 160 aa12.89□□□□□ -0.35
PSMC1-203ENST00000553835 TRAF5O00463 557 aa12.89□□□□□ -0.35
PSMC1-203ENST00000553835 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
PSMC1-203ENST00000553835 HTTP42858 3142 aa12.89□□□□□ -0.35
PSMC1-203ENST00000553835 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
PSMC1-203ENST00000553835 CEP290O15078 2479 aa12.87□□□□□ -0.35
PSMC1-203ENST00000553835 RNF186Q9NXI6 227 aa12.87□□□□□ -0.35
PSMC1-203ENST00000553835 FZD9O00144 591 aa12.86□□□□□ -0.35
PSMC1-203ENST00000553835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
PSMC1-203ENST00000553835 MPNDQ8N594 471 aa12.86□□□□□ -0.35
PSMC1-203ENST00000553835 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
PSMC1-203ENST00000553835 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
PSMC1-203ENST00000553835 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
PSMC1-203ENST00000553835 FAM155AB1AL88 458 aaPredicted RBP12.85□□□□□ -0.35
PSMC1-203ENST00000553835 NFIXQ14938 502 aa12.85□□□□□ -0.35
PSMC1-203ENST00000553835 GPC2Q8N158 579 aa12.85□□□□□ -0.35
PSMC1-203ENST00000553835 CENPFP49454 3210 aa12.85□□□□□ -0.35
PSMC1-203ENST00000553835 EVC2Q86UK5 1308 aa12.85□□□□□ -0.35
PSMC1-203ENST00000553835 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
PSMC1-203ENST00000553835 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
PSMC1-203ENST00000553835 USHBP1Q8N6Y0 703 aa12.84□□□□□ -0.35
PSMC1-203ENST00000553835 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
PSMC1-203ENST00000553835 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
PSMC1-203ENST00000553835 TRPA1O75762 1119 aa12.83□□□□□ -0.36
PSMC1-203ENST00000553835 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
PSMC1-203ENST00000553835 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
PSMC1-203ENST00000553835 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
PSMC1-203ENST00000553835 SERPINB2P05120 415 aa12.82□□□□□ -0.36
PSMC1-203ENST00000553835 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
PSMC1-203ENST00000553835 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
PSMC1-203ENST00000553835 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
PSMC1-203ENST00000553835 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
PSMC1-203ENST00000553835 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
PSMC1-203ENST00000553835 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
PSMC1-203ENST00000553835 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms