RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
TUBB3-202ENST00000553656 PNPLA7Q6ZV29 1317 aa17.96■□□□□ 0.46
TUBB3-202ENST00000553656 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
TUBB3-202ENST00000553656 LAMB4A4D0S4 1761 aa17.95■□□□□ 0.46
TUBB3-202ENST00000553656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
TUBB3-202ENST00000553656 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
TUBB3-202ENST00000553656 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
TUBB3-202ENST00000553656 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
TUBB3-202ENST00000553656 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
TUBB3-202ENST00000553656 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
TUBB3-202ENST00000553656 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 ADRA2BP18089 450 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 CANXP27824 592 aaKnown RBP17.94■□□□□ 0.46
TUBB3-202ENST00000553656 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
TUBB3-202ENST00000553656 ZBTB1Q9Y2K1 713 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 UBR3Q6ZT12 1888 aa17.94■□□□□ 0.46
TUBB3-202ENST00000553656 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
TUBB3-202ENST00000553656 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
TUBB3-202ENST00000553656 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
TUBB3-202ENST00000553656 A1BGP04217 495 aa17.92■□□□□ 0.46
TUBB3-202ENST00000553656 HOXB7P09629 217 aa17.92■□□□□ 0.46
TUBB3-202ENST00000553656 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
TUBB3-202ENST00000553656 RFC4P35249 363 aa17.92■□□□□ 0.46
TUBB3-202ENST00000553656 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-202ENST00000553656 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-202ENST00000553656 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
TUBB3-202ENST00000553656 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
TUBB3-202ENST00000553656 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
TUBB3-202ENST00000553656 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
TUBB3-202ENST00000553656 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
TUBB3-202ENST00000553656 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
TUBB3-202ENST00000553656 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
TUBB3-202ENST00000553656 A0A087WZG4 1122 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 E9PSI1 815 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-202ENST00000553656 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 AMIGO3Q86WK7 504 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-202ENST00000553656 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 COL15A1P39059 1388 aa17.9■□□□□ 0.46
TUBB3-202ENST00000553656 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
TUBB3-202ENST00000553656 ZBTB7AO95365 584 aa17.89■□□□□ 0.45
TUBB3-202ENST00000553656 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
TUBB3-202ENST00000553656 ARHGEF1Q92888 912 aaKnown RBP17.89■□□□□ 0.45
TUBB3-202ENST00000553656 ARXQ96QS3 562 aa17.89■□□□□ 0.45
TUBB3-202ENST00000553656 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
TUBB3-202ENST00000553656 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
TUBB3-202ENST00000553656 ZPR1O75312 459 aa17.87■□□□□ 0.45
TUBB3-202ENST00000553656 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-202ENST00000553656 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
TUBB3-202ENST00000553656 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
TUBB3-202ENST00000553656 SPON1Q9HCB6 807 aa17.87■□□□□ 0.45
TUBB3-202ENST00000553656 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-202ENST00000553656 MYL6BP14649 208 aa17.86■□□□□ 0.45
TUBB3-202ENST00000553656 TWISTNBQ3B726 338 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-202ENST00000553656 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
TUBB3-202ENST00000553656 C4AP0C0L4 1744 aa17.85■□□□□ 0.45
TUBB3-202ENST00000553656 EXOSC9Q06265 439 aaKnown RBP17.85■□□□□ 0.45
TUBB3-202ENST00000553656 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
TUBB3-202ENST00000553656 NBPF10Q6P3W6 841 aaKnown RBP17.85■□□□□ 0.45
TUBB3-202ENST00000553656 NBPF15Q8N660 670 aa17.85■□□□□ 0.45
TUBB3-202ENST00000553656 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
TUBB3-202ENST00000553656 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-202ENST00000553656 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 POLD1P28340 1107 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
TUBB3-202ENST00000553656 TSPYL6Q8N831 410 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 DBF4Q9UBU7 674 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-202ENST00000553656 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
TUBB3-202ENST00000553656 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.44
TUBB3-202ENST00000553656 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
TUBB3-202ENST00000553656 STK31Q9BXU1 1019 aa17.83■□□□□ 0.44
TUBB3-202ENST00000553656 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.44
TUBB3-202ENST00000553656 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.44
TUBB3-202ENST00000553656 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.44
TUBB3-202ENST00000553656 TBC1D2BQ9UPU7 963 aa17.83■□□□□ 0.44
TUBB3-202ENST00000553656 USPL1Q5W0Q7 1092 aa17.82■□□□□ 0.44
TUBB3-202ENST00000553656 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
TUBB3-202ENST00000553656 GYS1P13807 737 aa17.81■□□□□ 0.44
TUBB3-202ENST00000553656 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
TUBB3-202ENST00000553656 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
TUBB3-202ENST00000553656 ANXA1P04083 346 aa17.8■□□□□ 0.44
TUBB3-202ENST00000553656 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
TUBB3-202ENST00000553656 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-202ENST00000553656 PDIA6Q15084 440 aa17.79■□□□□ 0.44
TUBB3-202ENST00000553656 SCN7AQ01118 1682 aa17.79■□□□□ 0.44
TUBB3-202ENST00000553656 LRP5O75197 1615 aa17.79■□□□□ 0.44
TUBB3-202ENST00000553656 VAMP4O75379 141 aa17.78■□□□□ 0.44
TUBB3-202ENST00000553656 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
TUBB3-202ENST00000553656 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
TUBB3-202ENST00000553656 FKBP8Q14318 412 aa17.78■□□□□ 0.44
TUBB3-202ENST00000553656 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
TUBB3-202ENST00000553656 MMP10P09238 476 aa17.77■□□□□ 0.44
TUBB3-202ENST00000553656 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
TUBB3-202ENST00000553656 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
TUBB3-202ENST00000553656 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms