RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NOL8Q76FK4 1167 aaKnown RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 SPATA31A1Q5TZJ5 1347 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 NBPF7P0C2Y1 421 aaPredicted RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 SYNE4Q8N205 404 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 CNNM1Q9NRU3 951 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 EN1Q05925 392 aaPredicted RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 SRP68Q9UHB9 627 aaKnown RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 ZNF772Q68DY9 489 aaPredicted RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 IQSEC3Q9UPP2 1182 aaPredicted RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 HTATSF1O43719 755 aaKnown RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 HSP90AA1P07900 732 aaKnown RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 FAM196AQ6ZSG2 479 aa10.13□□□□□ -0.79
CHPT1-208ENST00000552215 BLMP54132 1417 aaPredicted RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 IL16Q14005 1332 aa10.13□□□□□ -0.79
CHPT1-208ENST00000552215 GNAI3P08754 354 aa10.13□□□□□ -0.79
CHPT1-208ENST00000552215 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 RTCBQ9Y3I0 505 aaKnown RBP10.13□□□□□ -0.79
CHPT1-208ENST00000552215 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
CHPT1-208ENST00000552215 C16orf71Q8IYS4 520 aaPredicted RBP10.12□□□□□ -0.79
CHPT1-208ENST00000552215 IFIT2P09913 472 aaKnown RBP10.12□□□□□ -0.79
CHPT1-208ENST00000552215 ALDH1L2Q3SY69 923 aa10.12□□□□□ -0.79
CHPT1-208ENST00000552215 CCDC8Q9H0W5 538 aaPredicted RBP10.12□□□□□ -0.79
CHPT1-208ENST00000552215 PPP1R42Q7Z4L9 355 aa10.12□□□□□ -0.79
CHPT1-208ENST00000552215 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
CHPT1-208ENST00000552215 JAG2Q9Y219 1238 aa10.12□□□□□ -0.79
CHPT1-208ENST00000552215 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
CHPT1-208ENST00000552215 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 DDX21Q9NR30 783 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 ANP32AP39687 249 aaKnown RBP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 CRKLP46109 303 aaKnown RBP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 CCDC57Q2TAC2 916 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 NBPF5PQ86XG9 351 aaPredicted RBP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 DNAJC2Q99543 621 aaKnown RBP10.11□□□□□ -0.79
CHPT1-208ENST00000552215 ERVV-2B6SEH9 535 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 VPS37DQ86XT2 251 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 SSH2Q76I76 1423 aa10.11□□□□□ -0.79
CHPT1-208ENST00000552215 CRB1P82279 1406 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 SPATA31A5Q5VU36 1347 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 SPATA31A7Q8IWB4 1347 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 MEGF6O75095 1541 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 RBM6P78332 1123 aaKnown RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 CHMP4CQ96CF2 233 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 VPS72Q15906 364 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 MPHOSPH8Q99549 860 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 ILDR1Q86SU0 546 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 TMX4Q9H1E5 349 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-208ENST00000552215 SNRKQ9NRH2 765 aa10.1□□□□□ -0.79
CHPT1-208ENST00000552215 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
CHPT1-208ENST00000552215 NALCNQ8IZF0 1738 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 HLFQ16534 295 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
CHPT1-208ENST00000552215 DCCP43146 1447 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 ZNF853P0CG23 659 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 POTEAQ6S8J7 498 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
CHPT1-208ENST00000552215 CT47B1P0C2W7 299 aaPredicted RBP10.09□□□□□ -0.79
CHPT1-208ENST00000552215 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
CHPT1-208ENST00000552215 SPATA31A6Q5VVP1 1343 aa10.08□□□□□ -0.8
CHPT1-208ENST00000552215 AACSQ86V21 672 aa10.08□□□□□ -0.8
CHPT1-208ENST00000552215 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
CHPT1-208ENST00000552215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.08□□□□□ -0.8
CHPT1-208ENST00000552215 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHPT1-208ENST00000552215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.84e-10■□□□□ 9.9
CHPT1-208ENST00000552215 CHD2O14647 1828 aaKnown RBP10.08□□□□□ -0.8
CHPT1-208ENST00000552215 GRM8O00222 908 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 MYOM1P52179 1685 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 TEX13AQ9BXU3 409 aaPredicted RBP10.07□□□□□ -0.8
CHPT1-208ENST00000552215 BICC1Q9H694 974 aaKnown RBP10.07□□□□□ -0.8
CHPT1-208ENST00000552215 PXDNQ92626 1479 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 PALLDQ8WX93 1383 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
CHPT1-208ENST00000552215 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 ITSN1Q15811 1721 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 CAMTA1Q9Y6Y1 1673 aa10.07□□□□□ -0.8
CHPT1-208ENST00000552215 OTUD7AQ8TE49 926 aaPredicted RBP10.07□□□□□ -0.8
CHPT1-208ENST00000552215 LDHAL6AQ6ZMR3 332 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 CLASRPQ8N2M8 674 aaKnown RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 CHAF1AQ13111 956 aaPredicted RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 ITPK1Q13572 414 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 METTL24Q5JXM2 366 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms