RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 NLGN1Q8N2Q7 840 aa22.31■■□□□ 1.16
LETMD1-230ENST00000551477 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
LETMD1-230ENST00000551477 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
LETMD1-230ENST00000551477 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
LETMD1-230ENST00000551477 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
LETMD1-230ENST00000551477 DCAF8L1A6NGE4 600 aa22.3■■□□□ 1.16
LETMD1-230ENST00000551477 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
LETMD1-230ENST00000551477 SYT17Q9BSW7 474 aa22.3■■□□□ 1.16
LETMD1-230ENST00000551477 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
LETMD1-230ENST00000551477 SOS1Q07889 1333 aaPredicted RBP22.3■■□□□ 1.16
LETMD1-230ENST00000551477 KLHL34Q8N239 644 aa22.29■■□□□ 1.16
LETMD1-230ENST00000551477 ZBTB1Q9Y2K1 713 aa22.29■■□□□ 1.16
LETMD1-230ENST00000551477 ZPR1O75312 459 aa22.28■■□□□ 1.16
LETMD1-230ENST00000551477 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
LETMD1-230ENST00000551477 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
LETMD1-230ENST00000551477 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
LETMD1-230ENST00000551477 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
LETMD1-230ENST00000551477 COL15A1P39059 1388 aa22.26■■□□□ 1.15
LETMD1-230ENST00000551477 A0A087WZG4 1122 aa22.26■■□□□ 1.15
LETMD1-230ENST00000551477 GYS1P13807 737 aa22.26■■□□□ 1.15
LETMD1-230ENST00000551477 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
LETMD1-230ENST00000551477 USP42Q9H9J4 1324 aaKnown RBP22.26■■□□□ 1.15
LETMD1-230ENST00000551477 APAF1O14727 1248 aa22.24■■□□□ 1.15
LETMD1-230ENST00000551477 MMP10P09238 476 aa22.24■■□□□ 1.15
LETMD1-230ENST00000551477 IL6STP40189 918 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-230ENST00000551477 EIF5P55010 431 aaKnown RBP22.24■■□□□ 1.15
LETMD1-230ENST00000551477 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
LETMD1-230ENST00000551477 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
LETMD1-230ENST00000551477 USP16Q9Y5T5 823 aa22.24■■□□□ 1.15
LETMD1-230ENST00000551477 EIF4A1P60842 406 aaKnown RBP22.23■■□□□ 1.15
LETMD1-230ENST00000551477 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
LETMD1-230ENST00000551477 LAMB4A4D0S4 1761 aa22.22■■□□□ 1.15
LETMD1-230ENST00000551477 A1BGP04217 495 aa22.22■■□□□ 1.15
LETMD1-230ENST00000551477 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
LETMD1-230ENST00000551477 CD2APQ9Y5K6 639 aa22.22■■□□□ 1.15
LETMD1-230ENST00000551477 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
LETMD1-230ENST00000551477 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
LETMD1-230ENST00000551477 GIGYF1O75420 1035 aaPredicted RBP22.21■■□□□ 1.15
LETMD1-230ENST00000551477 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
LETMD1-230ENST00000551477 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
LETMD1-230ENST00000551477 LAS1LQ9Y4W2 734 aaKnown RBP22.2■■□□□ 1.14
LETMD1-230ENST00000551477 FKBP8Q14318 412 aa22.19■■□□□ 1.14
LETMD1-230ENST00000551477 CHL1O00533 1208 aa22.18■■□□□ 1.14
LETMD1-230ENST00000551477 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
LETMD1-230ENST00000551477 CFAP44Q96MT7 982 aa22.16■■□□□ 1.14
LETMD1-230ENST00000551477 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
LETMD1-230ENST00000551477 SCN7AQ01118 1682 aa22.14■■□□□ 1.14
LETMD1-230ENST00000551477 TM4SF1P30408 202 aa22.14■■□□□ 1.13
LETMD1-230ENST00000551477 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.13
LETMD1-230ENST00000551477 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
LETMD1-230ENST00000551477 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
LETMD1-230ENST00000551477 GNAI1P63096 354 aa22.13■■□□□ 1.13
LETMD1-230ENST00000551477 ERBB4Q15303 1308 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 NBPF26B4DH59 902 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 GPR162Q16538 588 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
LETMD1-230ENST00000551477 NBPF10Q6P3W6 841 aaKnown RBP22.12■■□□□ 1.13
LETMD1-230ENST00000551477 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 NBPF15Q8N660 670 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 BCL2L12Q9HB09 334 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 IFT57Q9NWB7 429 aa22.12■■□□□ 1.13
LETMD1-230ENST00000551477 POLRMTO00411 1230 aaKnown RBP22.11■■□□□ 1.13
LETMD1-230ENST00000551477 DDR1Q08345 913 aa22.11■■□□□ 1.13
LETMD1-230ENST00000551477 NFIXQ14938 502 aa22.11■■□□□ 1.13
LETMD1-230ENST00000551477 CCDC27Q2M243 656 aa22.11■■□□□ 1.13
LETMD1-230ENST00000551477 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
LETMD1-230ENST00000551477 BCORQ6W2J9 1755 aa22.11■■□□□ 1.13
LETMD1-230ENST00000551477 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
LETMD1-230ENST00000551477 C10orf71Q711Q0 1435 aa22.1■■□□□ 1.13
LETMD1-230ENST00000551477 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
LETMD1-230ENST00000551477 CAMTA2O94983 1202 aa22.09■■□□□ 1.13
LETMD1-230ENST00000551477 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
LETMD1-230ENST00000551477 TGFB2P61812 414 aa22.09■■□□□ 1.13
LETMD1-230ENST00000551477 CLEC4GQ6UXB4 293 aa22.09■■□□□ 1.13
LETMD1-230ENST00000551477 MBIPQ9NS73 344 aa22.09■■□□□ 1.13
LETMD1-230ENST00000551477 AFDNP55196 1824 aaKnown RBP22.08■■□□□ 1.13
LETMD1-230ENST00000551477 RGL2O15211 777 aa22.08■■□□□ 1.13
LETMD1-230ENST00000551477 BICDL1Q6ZP65 573 aa22.08■■□□□ 1.13
LETMD1-230ENST00000551477 SERPINB2P05120 415 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 HOXB7P09629 217 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 MYL6BP14649 208 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 TBC1D9BQ66K14 1250 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 WWC1Q8IX03 1113 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 SETDB2Q96T68 719 aa22.07■■□□□ 1.12
LETMD1-230ENST00000551477 KIF6Q6ZMV9 814 aa22.06■■□□□ 1.12
LETMD1-230ENST00000551477 NRXN2Q9P2S2 1712 aa22.06■■□□□ 1.12
LETMD1-230ENST00000551477 CARMIL3Q8ND23 1372 aa22.05■■□□□ 1.12
LETMD1-230ENST00000551477 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
LETMD1-230ENST00000551477 SENP3-EIF4A1A0A087X0R7 540 aa22.04■■□□□ 1.12
LETMD1-230ENST00000551477 GRIN3BO60391 1043 aa22.04■■□□□ 1.12
LETMD1-230ENST00000551477 KRT24Q2M2I5 525 aa22.04■■□□□ 1.12
LETMD1-230ENST00000551477 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 ERVV-1B6SEH8 477 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 NPHP1O15259 732 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 CHMP4AQ9BY43 222 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 CHD4Q14839 1912 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 IL16Q14005 1332 aa22.03■■□□□ 1.12
LETMD1-230ENST00000551477 NUP98P52948 1817 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms