RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
GCN1-207ENST00000550471 ZNF496Q96IT1 587 aaPredicted RBP26.5■■□□□ 1.83
GCN1-207ENST00000550471 FKBP8Q14318 412 aa26.49■■□□□ 1.83
GCN1-207ENST00000550471 SRP68Q9UHB9 627 aaKnown RBP26.49■■□□□ 1.83
GCN1-207ENST00000550471 ZBTB1Q9Y2K1 713 aa26.49■■□□□ 1.83
GCN1-207ENST00000550471 TM4SF1P30408 202 aa26.48■■□□□ 1.83
GCN1-207ENST00000550471 USPL1Q5W0Q7 1092 aa26.48■■□□□ 1.83
GCN1-207ENST00000550471 PXDNLA1KZ92 1463 aa26.48■■□□□ 1.83
GCN1-207ENST00000550471 SIPA1L3O60292 1781 aaPredicted RBP26.46■■□□□ 1.83
GCN1-207ENST00000550471 IL6STP40189 918 aaPredicted RBP26.46■■□□□ 1.83
GCN1-207ENST00000550471 EIF5P55010 431 aaKnown RBP26.46■■□□□ 1.83
GCN1-207ENST00000550471 UTRNP46939 3433 aa26.45■■□□□ 1.82
GCN1-207ENST00000550471 POLRMTO00411 1230 aaKnown RBP26.44■■□□□ 1.82
GCN1-207ENST00000550471 CANXP27824 592 aaKnown RBP26.44■■□□□ 1.82
GCN1-207ENST00000550471 PNISRQ8TF01 805 aaKnown RBP26.44■■□□□ 1.82
GCN1-207ENST00000550471 PIM2Q9P1W9 311 aa26.43■■□□□ 1.82
GCN1-207ENST00000550471 A0A0G2JLW4 131 aa26.42■■□□□ 1.82
GCN1-207ENST00000550471 DDR1Q08345 913 aa26.42■■□□□ 1.82
GCN1-207ENST00000550471 SNRPA1P09661 255 aaKnown RBP26.41■■□□□ 1.82
GCN1-207ENST00000550471 DPEP1P16444 411 aa26.41■■□□□ 1.82
GCN1-207ENST00000550471 TAF7Q15545 349 aaPredicted RBP26.41■■□□□ 1.82
GCN1-207ENST00000550471 BCS1LQ9Y276 419 aa26.41■■□□□ 1.82
GCN1-207ENST00000550471 MAPK8IP3Q9UPT6 1336 aa26.4■■□□□ 1.82
GCN1-207ENST00000550471 MCM10Q7L590 875 aa26.4■■□□□ 1.82
GCN1-207ENST00000550471 PDZRN3Q9UPQ7 1066 aa26.4■■□□□ 1.82
GCN1-207ENST00000550471 GIGYF1O75420 1035 aaPredicted RBP26.39■■□□□ 1.82
GCN1-207ENST00000550471 NFIXQ14938 502 aa26.39■■□□□ 1.82
GCN1-207ENST00000550471 RGL2O15211 777 aa26.38■■□□□ 1.81
GCN1-207ENST00000550471 NFE2L2Q16236 605 aa26.37■■□□□ 1.81
GCN1-207ENST00000550471 DALRD3Q5D0E6 543 aaKnown RBP26.37■■□□□ 1.81
GCN1-207ENST00000550471 PLEKHF1Q96S99 279 aa26.37■■□□□ 1.81
GCN1-207ENST00000550471 ADCY9O60503 1353 aa26.36■■□□□ 1.81
GCN1-207ENST00000550471 SERPINB2P05120 415 aa26.36■■□□□ 1.81
GCN1-207ENST00000550471 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
GCN1-207ENST00000550471 BCL2L12Q9HB09 334 aa26.35■■□□□ 1.81
GCN1-207ENST00000550471 MYBBP1AQ9BQG0 1328 aaKnown RBP26.35■■□□□ 1.81
GCN1-207ENST00000550471 ATP10DQ9P241 1426 aa26.34■■□□□ 1.81
GCN1-207ENST00000550471 KCNA3P22001 575 aa26.34■■□□□ 1.81
GCN1-207ENST00000550471 DDX10Q13206 875 aaKnown RBP26.34■■□□□ 1.81
GCN1-207ENST00000550471 N4BP2Q86UW6 1770 aaPredicted RBP26.33■■□□□ 1.81
GCN1-207ENST00000550471 C1QTNF8P60827 252 aa26.33■■□□□ 1.81
GCN1-207ENST00000550471 CLEC4GQ6UXB4 293 aa26.33■■□□□ 1.81
GCN1-207ENST00000550471 GPBP1L1Q9HC44 474 aaPredicted RBP26.33■■□□□ 1.81
GCN1-207ENST00000550471 WWC3Q9ULE0 1092 aa26.33■■□□□ 1.81
GCN1-207ENST00000550471 KCNQ3O43525 872 aa26.32■■□□□ 1.8
GCN1-207ENST00000550471 A1BGP04217 495 aa26.32■■□□□ 1.8
GCN1-207ENST00000550471 LMOD3Q0VAK6 560 aa26.32■■□□□ 1.8
GCN1-207ENST00000550471 ARHGAP27Q6ZUM4 889 aa26.32■■□□□ 1.8
GCN1-207ENST00000550471 ZNF652Q9Y2D9 606 aa26.32■■□□□ 1.8
GCN1-207ENST00000550471 ZNF330Q9Y3S2 320 aaPredicted RBP26.32■■□□□ 1.8
GCN1-207ENST00000550471 DCTN1Q14203 1278 aa26.31■■□□□ 1.8
GCN1-207ENST00000550471 USP16Q9Y5T5 823 aa26.31■■□□□ 1.8
GCN1-207ENST00000550471 CARMIL3Q8ND23 1372 aa26.31■■□□□ 1.8
GCN1-207ENST00000550471 NRXN2Q9P2S2 1712 aa26.31■■□□□ 1.8
GCN1-207ENST00000550471 DZIP3Q86Y13 1208 aaKnown RBP26.3■■□□□ 1.8
GCN1-207ENST00000550471 SETDB2Q96T68 719 aa26.3■■□□□ 1.8
GCN1-207ENST00000550471 TBC1D2BQ9UPU7 963 aa26.3■■□□□ 1.8
GCN1-207ENST00000550471 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
GCN1-207ENST00000550471 BABAM1Q9NWV8 329 aa26.29■■□□□ 1.8
GCN1-207ENST00000550471 BRCA1P38398 1863 aaKnown RBP26.29■■□□□ 1.8
GCN1-207ENST00000550471 H0YIN7 160 aa26.28■■□□□ 1.8
GCN1-207ENST00000550471 PDE6BP35913 854 aa26.28■■□□□ 1.8
GCN1-207ENST00000550471 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
GCN1-207ENST00000550471 CAMTA2O94983 1202 aa26.27■■□□□ 1.8
GCN1-207ENST00000550471 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
GCN1-207ENST00000550471 BRIP1Q9BX63 1249 aa26.27■■□□□ 1.8
GCN1-207ENST00000550471 SCN7AQ01118 1682 aa26.27■■□□□ 1.8
GCN1-207ENST00000550471 TBC1D9BQ66K14 1250 aa26.26■■□□□ 1.79
GCN1-207ENST00000550471 BICDL1Q6ZP65 573 aa26.26■■□□□ 1.79
GCN1-207ENST00000550471 CHRNA5P30532 468 aa26.25■■□□□ 1.79
GCN1-207ENST00000550471 TTLL6Q8N841 843 aa26.25■■□□□ 1.79
GCN1-207ENST00000550471 NPHP1O15259 732 aa26.24■■□□□ 1.79
GCN1-207ENST00000550471 AFDNP55196 1824 aaKnown RBP26.23■■□□□ 1.79
GCN1-207ENST00000550471 ST5P78524 1137 aa26.23■■□□□ 1.79
GCN1-207ENST00000550471 WDR43Q15061 677 aaKnown RBP eCLIP26.23■■□□□ 1.79
GCN1-207ENST00000550471 C2CD5Q86YS7 1000 aa26.23■■□□□ 1.79
GCN1-207ENST00000550471 RIPK4P57078 832 aa26.22■■□□□ 1.79
GCN1-207ENST00000550471 CNBD1Q8NA66 436 aa26.22■■□□□ 1.79
GCN1-207ENST00000550471 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
GCN1-207ENST00000550471 ERBB4Q15303 1308 aa26.21■■□□□ 1.79
GCN1-207ENST00000550471 EIF4A1P60842 406 aaKnown RBP26.21■■□□□ 1.79
GCN1-207ENST00000550471 ZC3H4Q9UPT8 1303 aaKnown RBP26.2■■□□□ 1.79
GCN1-207ENST00000550471 PRR5LQ6MZQ0 368 aa26.2■■□□□ 1.78
GCN1-207ENST00000550471 PRAMEF22A3QJZ6 481 aa26.19■■□□□ 1.78
GCN1-207ENST00000550471 TMPOP42166 694 aaKnown RBP26.19■■□□□ 1.78
GCN1-207ENST00000550471 MIS18AQ9NYP9 233 aa26.19■■□□□ 1.78
GCN1-207ENST00000550471 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 NBPF26B4DH59 902 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 NBPF10Q6P3W6 841 aaKnown RBP26.18■■□□□ 1.78
GCN1-207ENST00000550471 TPTE2Q6XPS3 522 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 NBPF15Q8N660 670 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 RUNDC1Q96C34 613 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
GCN1-207ENST00000550471 ERVV-1B6SEH8 477 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 C9orf131Q5VYM1 1079 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 CNKSR1Q969H4 720 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 TSPYL4Q9UJ04 414 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 LAMB4A4D0S4 1761 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 DLEC1Q9Y238 1755 aa26.17■■□□□ 1.78
GCN1-207ENST00000550471 NBPF5PQ86XG9 351 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms