RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 USPL1Q5W0Q7 1092 aa26.04■■□□□ 1.76
ATF1-202ENST00000549612 TEX13AQ9BXU3 409 aaPredicted RBP26.04■■□□□ 1.76
ATF1-202ENST00000549612 NARFQ9UHQ1 456 aa26.04■■□□□ 1.76
ATF1-202ENST00000549612 FMNL2Q96PY5 1086 aa26.03■■□□□ 1.76
ATF1-202ENST00000549612 WWC3Q9ULE0 1092 aa26.03■■□□□ 1.76
ATF1-202ENST00000549612 BTBD11A6QL63 1104 aa26.02■■□□□ 1.76
ATF1-202ENST00000549612 TM4SF1P30408 202 aa26.02■■□□□ 1.76
ATF1-202ENST00000549612 A0A0G2JLW4 131 aa26.01■■□□□ 1.75
ATF1-202ENST00000549612 POLRMTO00411 1230 aaKnown RBP26.01■■□□□ 1.75
ATF1-202ENST00000549612 HTATSF1O43719 755 aaKnown RBP26.01■■□□□ 1.75
ATF1-202ENST00000549612 RTF1Q92541 710 aaKnown RBP26.01■■□□□ 1.75
ATF1-202ENST00000549612 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
ATF1-202ENST00000549612 EIF5P55010 431 aaKnown RBP26■■□□□ 1.75
ATF1-202ENST00000549612 MCM10Q7L590 875 aa26■■□□□ 1.75
ATF1-202ENST00000549612 N4BP2Q86UW6 1770 aaPredicted RBP26■■□□□ 1.75
ATF1-202ENST00000549612 DPEP1P16444 411 aa25.99■■□□□ 1.75
ATF1-202ENST00000549612 KCNQ3O43525 872 aa25.98■■□□□ 1.75
ATF1-202ENST00000549612 BCL2L12Q9HB09 334 aa25.98■■□□□ 1.75
ATF1-202ENST00000549612 ADCY9O60503 1353 aa25.97■■□□□ 1.75
ATF1-202ENST00000549612 A0A087WZG4 1122 aa25.96■■□□□ 1.75
ATF1-202ENST00000549612 NFIXQ14938 502 aa25.96■■□□□ 1.75
ATF1-202ENST00000549612 RALBP1Q15311 655 aa25.96■■□□□ 1.75
ATF1-202ENST00000549612 KCNA3P22001 575 aa25.95■■□□□ 1.74
ATF1-202ENST00000549612 DCTN1Q14203 1278 aa25.95■■□□□ 1.74
ATF1-202ENST00000549612 PLEKHF1Q96S99 279 aa25.95■■□□□ 1.74
ATF1-202ENST00000549612 BRCA1P38398 1863 aaKnown RBP25.94■■□□□ 1.74
ATF1-202ENST00000549612 NEFMP07197 916 aa25.94■■□□□ 1.74
ATF1-202ENST00000549612 IL6STP40189 918 aaPredicted RBP25.94■■□□□ 1.74
ATF1-202ENST00000549612 BCS1LQ9Y276 419 aa25.94■■□□□ 1.74
ATF1-202ENST00000549612 ATP10DQ9P241 1426 aa25.94■■□□□ 1.74
ATF1-202ENST00000549612 NRXN2Q9P2S2 1712 aa25.92■■□□□ 1.74
ATF1-202ENST00000549612 DDX10Q13206 875 aaKnown RBP25.92■■□□□ 1.74
ATF1-202ENST00000549612 A1BGP04217 495 aa25.91■■□□□ 1.74
ATF1-202ENST00000549612 SCN7AQ01118 1682 aa25.9■■□□□ 1.74
ATF1-202ENST00000549612 SNRPA1P09661 255 aaKnown RBP25.9■■□□□ 1.74
ATF1-202ENST00000549612 TAF7Q15545 349 aaPredicted RBP25.9■■□□□ 1.74
ATF1-202ENST00000549612 PNNQ9H307 717 aaKnown RBP25.9■■□□□ 1.74
ATF1-202ENST00000549612 PIM2Q9P1W9 311 aa25.9■■□□□ 1.74
ATF1-202ENST00000549612 USP16Q9Y5T5 823 aa25.9■■□□□ 1.74
ATF1-202ENST00000549612 SERPINB2P05120 415 aa25.89■■□□□ 1.74
ATF1-202ENST00000549612 NFE2L2Q16236 605 aa25.89■■□□□ 1.74
ATF1-202ENST00000549612 AFDNP55196 1824 aaKnown RBP25.88■■□□□ 1.73
ATF1-202ENST00000549612 PRAMEF22A3QJZ6 481 aa25.88■■□□□ 1.73
ATF1-202ENST00000549612 GIGYF1O75420 1035 aaPredicted RBP25.88■■□□□ 1.73
ATF1-202ENST00000549612 TBC1D2BQ9UPU7 963 aa25.88■■□□□ 1.73
ATF1-202ENST00000549612 ZNF330Q9Y3S2 320 aaPredicted RBP25.88■■□□□ 1.73
ATF1-202ENST00000549612 CHRNA5P30532 468 aa25.87■■□□□ 1.73
ATF1-202ENST00000549612 C1QTNF8P60827 252 aa25.87■■□□□ 1.73
ATF1-202ENST00000549612 DLG5Q8TDM6 1919 aa25.86■■□□□ 1.73
ATF1-202ENST00000549612 DALRD3Q5D0E6 543 aaKnown RBP25.86■■□□□ 1.73
ATF1-202ENST00000549612 ARFGEF1Q9Y6D6 1849 aa25.86■■□□□ 1.73
ATF1-202ENST00000549612 MAPK8IP3Q9UPT6 1336 aa25.86■■□□□ 1.73
ATF1-202ENST00000549612 TBC1D9BQ66K14 1250 aa25.85■■□□□ 1.73
ATF1-202ENST00000549612 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
ATF1-202ENST00000549612 PNISRQ8TF01 805 aaKnown RBP25.85■■□□□ 1.73
ATF1-202ENST00000549612 MYBBP1AQ9BQG0 1328 aaKnown RBP25.85■■□□□ 1.73
ATF1-202ENST00000549612 CAMTA2O94983 1202 aa25.84■■□□□ 1.73
ATF1-202ENST00000549612 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
ATF1-202ENST00000549612 ARHGAP27Q6ZUM4 889 aa25.84■■□□□ 1.73
ATF1-202ENST00000549612 MIS18AQ9NYP9 233 aa25.83■■□□□ 1.73
ATF1-202ENST00000549612 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
ATF1-202ENST00000549612 DZIP3Q86Y13 1208 aaKnown RBP25.82■■□□□ 1.72
ATF1-202ENST00000549612 GPBP1L1Q9HC44 474 aaPredicted RBP25.82■■□□□ 1.72
ATF1-202ENST00000549612 PIP4K2AP48426 406 aaPredicted RBP25.81■■□□□ 1.72
ATF1-202ENST00000549612 BCORQ6W2J9 1755 aa25.81■■□□□ 1.72
ATF1-202ENST00000549612 KDM3BQ7LBC6 1761 aa25.81■■□□□ 1.72
ATF1-202ENST00000549612 THUMPD2Q9BTF0 503 aaKnown RBP25.8■■□□□ 1.72
ATF1-202ENST00000549612 NBPF26B4DH59 902 aa25.79■■□□□ 1.72
ATF1-202ENST00000549612 NBPF10Q6P3W6 841 aaKnown RBP25.79■■□□□ 1.72
ATF1-202ENST00000549612 NBPF15Q8N660 670 aa25.79■■□□□ 1.72
ATF1-202ENST00000549612 DLEC1Q9Y238 1755 aa25.78■■□□□ 1.72
ATF1-202ENST00000549612 ZNF526Q8TF50 670 aaPredicted RBP25.78■■□□□ 1.72
ATF1-202ENST00000549612 LAMB4A4D0S4 1761 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 RGL2O15211 777 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 CLEC4GQ6UXB4 293 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 C2CD5Q86YS7 1000 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 SETDB2Q96T68 719 aa25.77■■□□□ 1.72
ATF1-202ENST00000549612 EIF4A1P60842 406 aaKnown RBP25.76■■□□□ 1.71
ATF1-202ENST00000549612 BRIP1Q9BX63 1249 aa25.76■■□□□ 1.71
ATF1-202ENST00000549612 H0YIN7 160 aa25.75■■□□□ 1.71
ATF1-202ENST00000549612 PDZRN3Q9UPQ7 1066 aa25.75■■□□□ 1.71
ATF1-202ENST00000549612 RIPK4P57078 832 aa25.74■■□□□ 1.71
ATF1-202ENST00000549612 TTLL6Q8N841 843 aa25.74■■□□□ 1.71
ATF1-202ENST00000549612 ZNF652Q9Y2D9 606 aa25.74■■□□□ 1.71
ATF1-202ENST00000549612 ANKRD31Q8N7Z5 1873 aa25.74■■□□□ 1.71
ATF1-202ENST00000549612 PDE6BP35913 854 aa25.73■■□□□ 1.71
ATF1-202ENST00000549612 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
ATF1-202ENST00000549612 C9orf131Q5VYM1 1079 aa25.73■■□□□ 1.71
ATF1-202ENST00000549612 CNBD1Q8NA66 436 aa25.73■■□□□ 1.71
ATF1-202ENST00000549612 LMOD3Q0VAK6 560 aa25.72■■□□□ 1.71
ATF1-202ENST00000549612 PRKRIP1Q9H875 184 aaPredicted RBP25.71■■□□□ 1.71
ATF1-202ENST00000549612 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
ATF1-202ENST00000549612 CCDC24Q8N4L8 307 aa25.7■■□□□ 1.7
ATF1-202ENST00000549612 BABAM1Q9NWV8 329 aa25.7■■□□□ 1.7
ATF1-202ENST00000549612 ST5P78524 1137 aa25.69■■□□□ 1.7
ATF1-202ENST00000549612 TSPYL4Q9UJ04 414 aa25.69■■□□□ 1.7
ATF1-202ENST00000549612 COL11A2P13942 1736 aaPredicted RBP25.68■■□□□ 1.7
ATF1-202ENST00000549612 KIF3CO14782 793 aa25.68■■□□□ 1.7
ATF1-202ENST00000549612 NPHP1O15259 732 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms