RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CNTNAP4Q9C0A0 1308 aa22.57■■□□□ 1.2
HDAC7-227ENST00000548080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.56■■□□□ 1.2
HDAC7-227ENST00000548080 INTS5Q6P9B9 1019 aaKnown RBP22.56■■□□□ 1.2
HDAC7-227ENST00000548080 E9PSI1 815 aa22.55■■□□□ 1.2
HDAC7-227ENST00000548080 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
HDAC7-227ENST00000548080 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
HDAC7-227ENST00000548080 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
HDAC7-227ENST00000548080 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
HDAC7-227ENST00000548080 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
HDAC7-227ENST00000548080 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
HDAC7-227ENST00000548080 SRCAPQ6ZRS2 3230 aa22.54■■□□□ 1.2
HDAC7-227ENST00000548080 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
HDAC7-227ENST00000548080 TRMT2AQ8IZ69 625 aaKnown RBP22.54■■□□□ 1.2
HDAC7-227ENST00000548080 RTCBQ9Y3I0 505 aaKnown RBP22.54■■□□□ 1.2
HDAC7-227ENST00000548080 A1BGP04217 495 aa22.53■■□□□ 1.2
HDAC7-227ENST00000548080 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
HDAC7-227ENST00000548080 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
HDAC7-227ENST00000548080 CHL1O00533 1208 aa22.52■■□□□ 1.2
HDAC7-227ENST00000548080 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
HDAC7-227ENST00000548080 SNRPA1P09661 255 aaKnown RBP22.52■■□□□ 1.2
HDAC7-227ENST00000548080 SSFA2P28290 1259 aa22.52■■□□□ 1.2
HDAC7-227ENST00000548080 DUSP27Q5VZP5 1158 aa22.52■■□□□ 1.2
HDAC7-227ENST00000548080 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
HDAC7-227ENST00000548080 C4AP0C0L4 1744 aa22.52■■□□□ 1.19
HDAC7-227ENST00000548080 STARD3NLO95772 234 aa22.51■■□□□ 1.19
HDAC7-227ENST00000548080 HMGB2P26583 209 aaKnown RBP22.51■■□□□ 1.19
HDAC7-227ENST00000548080 LAMB4A4D0S4 1761 aa22.51■■□□□ 1.19
HDAC7-227ENST00000548080 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
HDAC7-227ENST00000548080 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
HDAC7-227ENST00000548080 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
HDAC7-227ENST00000548080 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
HDAC7-227ENST00000548080 TEX13AQ9BXU3 409 aaPredicted RBP22.49■■□□□ 1.19
HDAC7-227ENST00000548080 SPON1Q9HCB6 807 aa22.49■■□□□ 1.19
HDAC7-227ENST00000548080 SUPT16HQ9Y5B9 1047 aaKnown RBP22.49■■□□□ 1.19
HDAC7-227ENST00000548080 IL16Q14005 1332 aa22.49■■□□□ 1.19
HDAC7-227ENST00000548080 SOS1Q07889 1333 aaPredicted RBP22.48■■□□□ 1.19
HDAC7-227ENST00000548080 LRP5O75197 1615 aa22.48■■□□□ 1.19
HDAC7-227ENST00000548080 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
HDAC7-227ENST00000548080 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
HDAC7-227ENST00000548080 FLAD1Q8NFF5 587 aa22.48■■□□□ 1.19
HDAC7-227ENST00000548080 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
HDAC7-227ENST00000548080 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
HDAC7-227ENST00000548080 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 TSR2Q969E8 191 aaKnown RBP22.47■■□□□ 1.19
HDAC7-227ENST00000548080 IFT57Q9NWB7 429 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 BABAM1Q9NWV8 329 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 GNAI1P63096 354 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 NECTIN2Q92692 538 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 GTF3C3Q9Y5Q9 886 aa22.47■■□□□ 1.19
HDAC7-227ENST00000548080 COL15A1P39059 1388 aa22.46■■□□□ 1.19
HDAC7-227ENST00000548080 CALD1Q05682 793 aaKnown RBP22.46■■□□□ 1.19
HDAC7-227ENST00000548080 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
HDAC7-227ENST00000548080 RFC4P35249 363 aa22.45■■□□□ 1.18
HDAC7-227ENST00000548080 PTGER2P43116 358 aa22.45■■□□□ 1.18
HDAC7-227ENST00000548080 EIF2S2P20042 333 aaKnown RBP22.44■■□□□ 1.18
HDAC7-227ENST00000548080 SLC16A10Q8TF71 515 aa22.44■■□□□ 1.18
HDAC7-227ENST00000548080 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
HDAC7-227ENST00000548080 ADRA2BP18089 450 aa22.43■■□□□ 1.18
HDAC7-227ENST00000548080 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
HDAC7-227ENST00000548080 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
HDAC7-227ENST00000548080 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
HDAC7-227ENST00000548080 ELL2O00472 640 aaPredicted RBP22.42■■□□□ 1.18
HDAC7-227ENST00000548080 ARXQ96QS3 562 aa22.42■■□□□ 1.18
HDAC7-227ENST00000548080 EIF5P55010 431 aaKnown RBP22.41■■□□□ 1.18
HDAC7-227ENST00000548080 SGIP1Q9BQI5 828 aa22.41■■□□□ 1.18
HDAC7-227ENST00000548080 COL24A1Q17RW2 1714 aa22.41■■□□□ 1.18
HDAC7-227ENST00000548080 MYL6BP14649 208 aa22.41■■□□□ 1.18
HDAC7-227ENST00000548080 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
HDAC7-227ENST00000548080 PPP1R1BQ9UD71 204 aaPredicted RBP22.41■■□□□ 1.18
HDAC7-227ENST00000548080 TBC1D2BQ9UPU7 963 aa22.41■■□□□ 1.18
HDAC7-227ENST00000548080 USP42Q9H9J4 1324 aaKnown RBP22.4■■□□□ 1.18
HDAC7-227ENST00000548080 ANXA1P04083 346 aa22.4■■□□□ 1.18
HDAC7-227ENST00000548080 GYS1P13807 737 aa22.4■■□□□ 1.18
HDAC7-227ENST00000548080 NEFLP07196 543 aa22.39■■□□□ 1.17
HDAC7-227ENST00000548080 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.17
HDAC7-227ENST00000548080 C8orf58Q8NAV2 365 aa22.39■■□□□ 1.17
HDAC7-227ENST00000548080 ZPR1O75312 459 aa22.38■■□□□ 1.17
HDAC7-227ENST00000548080 FKBP8Q14318 412 aa22.38■■□□□ 1.17
HDAC7-227ENST00000548080 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
HDAC7-227ENST00000548080 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
HDAC7-227ENST00000548080 POLD1P28340 1107 aa22.37■■□□□ 1.17
HDAC7-227ENST00000548080 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
HDAC7-227ENST00000548080 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
HDAC7-227ENST00000548080 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
HDAC7-227ENST00000548080 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
HDAC7-227ENST00000548080 SCN7AQ01118 1682 aa22.36■■□□□ 1.17
HDAC7-227ENST00000548080 HDGFL1Q5TGJ6 251 aa22.35■■□□□ 1.17
HDAC7-227ENST00000548080 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
HDAC7-227ENST00000548080 DZIP3Q86Y13 1208 aaKnown RBP22.35■■□□□ 1.17
HDAC7-227ENST00000548080 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
HDAC7-227ENST00000548080 A0A087WZG4 1122 aa22.34■■□□□ 1.17
HDAC7-227ENST00000548080 MMP10P09238 476 aa22.34■■□□□ 1.17
HDAC7-227ENST00000548080 PDIA6Q15084 440 aa22.34■■□□□ 1.17
HDAC7-227ENST00000548080 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
HDAC7-227ENST00000548080 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
HDAC7-227ENST00000548080 CAMTA2O94983 1202 aa22.33■■□□□ 1.16
HDAC7-227ENST00000548080 TTLL7Q6ZT98 887 aa22.33■■□□□ 1.16
HDAC7-227ENST00000548080 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
HDAC7-227ENST00000548080 BICDL1Q6ZP65 573 aa22.32■■□□□ 1.16
HDAC7-227ENST00000548080 NLGN1Q8N2Q7 840 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms