RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ZNF790Q6PG37 636 aa22.36■■□□□ 1.17
RBFOX1-207ENST00000547338 ARHGEF1Q92888 912 aaKnown RBP22.36■■□□□ 1.17
RBFOX1-207ENST00000547338 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
RBFOX1-207ENST00000547338 VSIG10Q8N0Z9 540 aa22.35■■□□□ 1.17
RBFOX1-207ENST00000547338 HTATSF1O43719 755 aaKnown RBP22.34■■□□□ 1.17
RBFOX1-207ENST00000547338 ADRA2BP18089 450 aa22.34■■□□□ 1.17
RBFOX1-207ENST00000547338 TRAPPC3LQ5T215 181 aa22.34■■□□□ 1.17
RBFOX1-207ENST00000547338 HEG1Q9ULI3 1381 aa22.34■■□□□ 1.17
RBFOX1-207ENST00000547338 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
RBFOX1-207ENST00000547338 NLGN2Q8NFZ4 835 aa22.33■■□□□ 1.17
RBFOX1-207ENST00000547338 CCDC87Q9NVE4 849 aa22.33■■□□□ 1.17
RBFOX1-207ENST00000547338 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-207ENST00000547338 BTBD11A6QL63 1104 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 GYS1P13807 737 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 TTC5Q8N0Z6 440 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 CDCA7LQ96GN5 454 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-207ENST00000547338 UTRNP46939 3433 aa22.3■■□□□ 1.16
RBFOX1-207ENST00000547338 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-207ENST00000547338 SRP68Q9UHB9 627 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-207ENST00000547338 GOLGB1Q14789 3259 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-207ENST00000547338 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
RBFOX1-207ENST00000547338 USP42Q9H9J4 1324 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-207ENST00000547338 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
RBFOX1-207ENST00000547338 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
RBFOX1-207ENST00000547338 KLHL34Q8N239 644 aa22.28■■□□□ 1.16
RBFOX1-207ENST00000547338 PRAMEF22A3QJZ6 481 aa22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 E9PSI1 815 aa22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 RFC4P35249 363 aa22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
RBFOX1-207ENST00000547338 MMP10P09238 476 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 MAPK8IP3Q9UPT6 1336 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 COL15A1P39059 1388 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 CCDC146Q8IYE0 955 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
RBFOX1-207ENST00000547338 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
RBFOX1-207ENST00000547338 KIF13BQ9NQT8 1826 aa22.25■■□□□ 1.15
RBFOX1-207ENST00000547338 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
RBFOX1-207ENST00000547338 NEFMP07197 916 aa22.24■■□□□ 1.15
RBFOX1-207ENST00000547338 TMPOP42166 694 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-207ENST00000547338 NLGN1Q8N2Q7 840 aa22.24■■□□□ 1.15
RBFOX1-207ENST00000547338 CD2APQ9Y5K6 639 aa22.24■■□□□ 1.15
RBFOX1-207ENST00000547338 APAF1O14727 1248 aa22.23■■□□□ 1.15
RBFOX1-207ENST00000547338 EIF5P55010 431 aaKnown RBP22.23■■□□□ 1.15
RBFOX1-207ENST00000547338 CCDC27Q2M243 656 aa22.23■■□□□ 1.15
RBFOX1-207ENST00000547338 USP16Q9Y5T5 823 aa22.23■■□□□ 1.15
RBFOX1-207ENST00000547338 STARD3NLO95772 234 aa22.22■■□□□ 1.15
RBFOX1-207ENST00000547338 CANXP27824 592 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-207ENST00000547338 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
RBFOX1-207ENST00000547338 A1BGP04217 495 aa22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 RIPK4P57078 832 aa22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 DDR1Q08345 913 aa22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 TEX13AQ9BXU3 409 aaPredicted RBP22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 RRP7AQ9Y3A4 280 aaKnown RBP22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 C10orf71Q711Q0 1435 aa22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
RBFOX1-207ENST00000547338 SCN7AQ01118 1682 aa22.2■■□□□ 1.14
RBFOX1-207ENST00000547338 NARFQ9UHQ1 456 aa22.2■■□□□ 1.14
RBFOX1-207ENST00000547338 LAMB4A4D0S4 1761 aa22.19■■□□□ 1.14
RBFOX1-207ENST00000547338 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
RBFOX1-207ENST00000547338 WDR63Q8IWG1 891 aa22.19■■□□□ 1.14
RBFOX1-207ENST00000547338 SNRPA1P09661 255 aaKnown RBP22.18■■□□□ 1.14
RBFOX1-207ENST00000547338 YBX3P16989 372 aaKnown RBP eCLIP22.18■■□□□ 1.14
RBFOX1-207ENST00000547338 TM4SF1P30408 202 aa22.18■■□□□ 1.14
RBFOX1-207ENST00000547338 TRIM35Q9UPQ4 493 aa22.18■■□□□ 1.14
RBFOX1-207ENST00000547338 PXDNLA1KZ92 1463 aa22.17■■□□□ 1.14
RBFOX1-207ENST00000547338 PIP4K2AP48426 406 aaPredicted RBP22.17■■□□□ 1.14
RBFOX1-207ENST00000547338 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
RBFOX1-207ENST00000547338 IL6STP40189 918 aaPredicted RBP22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 NBPF26B4DH59 902 aa22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 POLRMTO00411 1230 aaKnown RBP22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 ZPR1O75312 459 aa22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 NBPF10Q6P3W6 841 aaKnown RBP22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 NBPF15Q8N660 670 aa22.16■■□□□ 1.14
RBFOX1-207ENST00000547338 NRXN2Q9P2S2 1712 aa22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 AFDNP55196 1824 aaKnown RBP22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 BCORQ6W2J9 1755 aa22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 NFIXQ14938 502 aa22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
RBFOX1-207ENST00000547338 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.13
RBFOX1-207ENST00000547338 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
RBFOX1-207ENST00000547338 WWC1Q8IX03 1113 aa22.14■■□□□ 1.13
RBFOX1-207ENST00000547338 PARP3Q9Y6F1 533 aa22.14■■□□□ 1.13
RBFOX1-207ENST00000547338 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
RBFOX1-207ENST00000547338 DCAF8L1A6NGE4 600 aa22.13■■□□□ 1.13
RBFOX1-207ENST00000547338 GPR162Q16538 588 aa22.13■■□□□ 1.13
RBFOX1-207ENST00000547338 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
RBFOX1-207ENST00000547338 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
RBFOX1-207ENST00000547338 BRCA1P38398 1863 aaKnown RBP22.11■■□□□ 1.13
RBFOX1-207ENST00000547338 CHD4Q14839 1912 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms