RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 FCHSD2O94868 740 aa19.2■□□□□ 0.66
TROAP-203ENST00000546735 KCNA3P22001 575 aa19.2■□□□□ 0.66
TROAP-203ENST00000546735 TM4SF1P30408 202 aa19.2■□□□□ 0.66
TROAP-203ENST00000546735 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
TROAP-203ENST00000546735 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
TROAP-203ENST00000546735 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
TROAP-203ENST00000546735 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
TROAP-203ENST00000546735 COL15A1P39059 1388 aa19.19■□□□□ 0.66
TROAP-203ENST00000546735 U2AF1L5P0DN76 240 aaPredicted RBP19.18■□□□□ 0.66
TROAP-203ENST00000546735 CHRNA5P30532 468 aa19.18■□□□□ 0.66
TROAP-203ENST00000546735 U2AF1Q01081 240 aaKnown RBP eCLIP19.18■□□□□ 0.66
TROAP-203ENST00000546735 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
TROAP-203ENST00000546735 ARHGAP27Q6ZUM4 889 aa19.18■□□□□ 0.66
TROAP-203ENST00000546735 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
TROAP-203ENST00000546735 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
TROAP-203ENST00000546735 KCNQ3O43525 872 aa19.17■□□□□ 0.66
TROAP-203ENST00000546735 NFIXQ14938 502 aa19.17■□□□□ 0.66
TROAP-203ENST00000546735 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
TROAP-203ENST00000546735 UBR2Q8IWV8 1755 aa19.16■□□□□ 0.66
TROAP-203ENST00000546735 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
TROAP-203ENST00000546735 STARD3NLO95772 234 aa19.15■□□□□ 0.66
TROAP-203ENST00000546735 PIM2Q9P1W9 311 aa19.15■□□□□ 0.66
TROAP-203ENST00000546735 CEMIPQ8WUJ3 1361 aa19.15■□□□□ 0.66
TROAP-203ENST00000546735 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
TROAP-203ENST00000546735 ZNF330Q9Y3S2 320 aaPredicted RBP19.14■□□□□ 0.65
TROAP-203ENST00000546735 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
TROAP-203ENST00000546735 BICDL1Q6ZP65 573 aa19.13■□□□□ 0.65
TROAP-203ENST00000546735 MCM10Q7L590 875 aa19.13■□□□□ 0.65
TROAP-203ENST00000546735 FMNL2Q96PY5 1086 aa19.13■□□□□ 0.65
TROAP-203ENST00000546735 SIPA1L3O60292 1781 aaPredicted RBP19.12■□□□□ 0.65
TROAP-203ENST00000546735 A1BGP04217 495 aa19.12■□□□□ 0.65
TROAP-203ENST00000546735 SERPINB2P05120 415 aa19.12■□□□□ 0.65
TROAP-203ENST00000546735 DCTN1Q14203 1278 aa19.12■□□□□ 0.65
TROAP-203ENST00000546735 DALRD3Q5D0E6 543 aaKnown RBP19.12■□□□□ 0.65
TROAP-203ENST00000546735 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
TROAP-203ENST00000546735 BRCA1P38398 1863 aaKnown RBP19.11■□□□□ 0.65
TROAP-203ENST00000546735 RTF1Q92541 710 aaKnown RBP19.1■□□□□ 0.65
TROAP-203ENST00000546735 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
TROAP-203ENST00000546735 CARMIL3Q8ND23 1372 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 A0A087WZG4 1122 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 KIF3CO14782 793 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 PIP4K2AP48426 406 aaPredicted RBP19.09■□□□□ 0.65
TROAP-203ENST00000546735 C9orf131Q5VYM1 1079 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 TBC1D9BQ66K14 1250 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
TROAP-203ENST00000546735 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
TROAP-203ENST00000546735 IL6STP40189 918 aaPredicted RBP19.07■□□□□ 0.64
TROAP-203ENST00000546735 CCDC24Q8N4L8 307 aa19.07■□□□□ 0.64
TROAP-203ENST00000546735 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
TROAP-203ENST00000546735 ARFGEF1Q9Y6D6 1849 aa19.05■□□□□ 0.64
TROAP-203ENST00000546735 C2CD5Q86YS7 1000 aa19.05■□□□□ 0.64
TROAP-203ENST00000546735 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
TROAP-203ENST00000546735 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
TROAP-203ENST00000546735 NMRK2Q9NPI5 230 aa19.04■□□□□ 0.64
TROAP-203ENST00000546735 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
TROAP-203ENST00000546735 RNF181Q9P0P0 153 aa19.04■□□□□ 0.64
TROAP-203ENST00000546735 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
TROAP-203ENST00000546735 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
TROAP-203ENST00000546735 RASSF7Q02833 373 aa19.03■□□□□ 0.64
TROAP-203ENST00000546735 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
TROAP-203ENST00000546735 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
TROAP-203ENST00000546735 PRR5LQ6MZQ0 368 aa19.02■□□□□ 0.64
TROAP-203ENST00000546735 H0YIN7 160 aa19.01■□□□□ 0.63
TROAP-203ENST00000546735 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
TROAP-203ENST00000546735 TTLL6Q8N841 843 aa19.01■□□□□ 0.63
TROAP-203ENST00000546735 HSPA6P17066 643 aa19■□□□□ 0.63
TROAP-203ENST00000546735 PLEKHF1Q96S99 279 aa19■□□□□ 0.63
TROAP-203ENST00000546735 SETDB2Q96T68 719 aa19■□□□□ 0.63
TROAP-203ENST00000546735 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
TROAP-203ENST00000546735 NEFMP07197 916 aa18.99■□□□□ 0.63
TROAP-203ENST00000546735 PRELPP51888 382 aa18.99■□□□□ 0.63
TROAP-203ENST00000546735 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
TROAP-203ENST00000546735 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
TROAP-203ENST00000546735 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
TROAP-203ENST00000546735 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
TROAP-203ENST00000546735 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
TROAP-203ENST00000546735 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
TROAP-203ENST00000546735 NPHP1O15259 732 aa18.97■□□□□ 0.63
TROAP-203ENST00000546735 TOMM70O94826 608 aa18.97■□□□□ 0.63
TROAP-203ENST00000546735 PDE6BP35913 854 aa18.97■□□□□ 0.63
TROAP-203ENST00000546735 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
TROAP-203ENST00000546735 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.63
TROAP-203ENST00000546735 NFE2L2Q16236 605 aa18.96■□□□□ 0.63
TROAP-203ENST00000546735 ANKRD31Q8N7Z5 1873 aa18.96■□□□□ 0.63
TROAP-203ENST00000546735 NFKBIEO00221 500 aa18.95■□□□□ 0.62
TROAP-203ENST00000546735 RRAGCQ9HB90 399 aa18.95■□□□□ 0.62
TROAP-203ENST00000546735 BCORQ6W2J9 1755 aa18.95■□□□□ 0.62
TROAP-203ENST00000546735 C21orf2O43822 256 aa18.94■□□□□ 0.62
TROAP-203ENST00000546735 LMNB1P20700 586 aa18.94■□□□□ 0.62
TROAP-203ENST00000546735 ST5P78524 1137 aa18.94■□□□□ 0.62
TROAP-203ENST00000546735 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
TROAP-203ENST00000546735 KDM2BQ8NHM5 1336 aa18.94■□□□□ 0.62
TROAP-203ENST00000546735 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
TROAP-203ENST00000546735 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
TROAP-203ENST00000546735 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
TROAP-203ENST00000546735 HLFQ16534 295 aa18.93■□□□□ 0.62
TROAP-203ENST00000546735 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
TROAP-203ENST00000546735 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
TROAP-203ENST00000546735 SBF1O95248 1867 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms