RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
DDX11-229ENST00000545668 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
DDX11-229ENST00000545668 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
DDX11-229ENST00000545668 OTUD7AQ8TE49 926 aaPredicted RBP11.85□□□□□ -0.51
DDX11-229ENST00000545668 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
DDX11-229ENST00000545668 EXOC6BQ9Y2D4 811 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 ST18O60284 1047 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
DDX11-229ENST00000545668 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
DDX11-229ENST00000545668 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
DDX11-229ENST00000545668 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 ERBB3P21860 1342 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
DDX11-229ENST00000545668 ANXA1P04083 346 aa11.83□□□□□ -0.51
DDX11-229ENST00000545668 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.51
DDX11-229ENST00000545668 LRRFIP2Q9Y608 721 aaKnown RBP11.83□□□□□ -0.51
DDX11-229ENST00000545668 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
DDX11-229ENST00000545668 HOXB7P09629 217 aa11.83□□□□□ -0.52
DDX11-229ENST00000545668 FGD1P98174 961 aa11.83□□□□□ -0.52
DDX11-229ENST00000545668 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
DDX11-229ENST00000545668 RBM25P49756 843 aaKnown RBP11.83□□□□□ -0.52
DDX11-229ENST00000545668 SLIT3O75094 1523 aa11.83□□□□□ -0.52
DDX11-229ENST00000545668 PDIA4P13667 645 aaKnown RBP11.82□□□□□ -0.52
DDX11-229ENST00000545668 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 NEK4P51957 841 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 MST1RQ04912 1400 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
DDX11-229ENST00000545668 PNMA6EA0A0J9YXQ4 647 aa11.81□□□□□ -0.52
DDX11-229ENST00000545668 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
DDX11-229ENST00000545668 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
DDX11-229ENST00000545668 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
DDX11-229ENST00000545668 LRRCC1Q9C099 1032 aa11.81□□□□□ -0.52
DDX11-229ENST00000545668 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
DDX11-229ENST00000545668 SDSP20132 328 aa11.8□□□□□ -0.52
DDX11-229ENST00000545668 PXDNQ92626 1479 aa11.8□□□□□ -0.52
DDX11-229ENST00000545668 RGPD2P0DJD1 1756 aa11.8□□□□□ -0.52
DDX11-229ENST00000545668 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
DDX11-229ENST00000545668 KIF1AQ12756 1690 aa11.8□□□□□ -0.52
DDX11-229ENST00000545668 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
DDX11-229ENST00000545668 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
DDX11-229ENST00000545668 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
DDX11-229ENST00000545668 NCAPD2Q15021 1401 aa11.79□□□□□ -0.52
DDX11-229ENST00000545668 CLCN1P35523 988 aa11.79□□□□□ -0.52
DDX11-229ENST00000545668 PDE1AP54750 535 aa11.79□□□□□ -0.52
DDX11-229ENST00000545668 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
DDX11-229ENST00000545668 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
DDX11-229ENST00000545668 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 PTMSP20962 102 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 NUCB2P80303 420 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 RABEP1Q15276 862 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 DCCP43146 1447 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 REC8O95072 547 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
DDX11-229ENST00000545668 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 PKP1Q13835 747 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
DDX11-229ENST00000545668 FSD2A1L4K1 749 aa11.77□□□□□ -0.52
DDX11-229ENST00000545668 SRGAP3O43295 1099 aa11.77□□□□□ -0.52
DDX11-229ENST00000545668 CBX1P83916 185 aa11.77□□□□□ -0.52
DDX11-229ENST00000545668 OS9Q13438 667 aaPredicted RBP11.77□□□□□ -0.52
DDX11-229ENST00000545668 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.52
DDX11-229ENST00000545668 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.52
DDX11-229ENST00000545668 MAP4K4O95819 1239 aaPredicted RBP11.77□□□□□ -0.53
DDX11-229ENST00000545668 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
DDX11-229ENST00000545668 BEND3Q5T5X7 828 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 UPF3BQ9BZI7 483 aaKnown RBP11.77□□□□□ -0.53
DDX11-229ENST00000545668 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
DDX11-229ENST00000545668 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 MX1P20591 662 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 MCCP23508 829 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
DDX11-229ENST00000545668 SYCE3A1L190 88 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 SNX21Q969T3 373 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
DDX11-229ENST00000545668 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 DTNBO60941 627 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 MED1Q15648 1581 aaPredicted RBP11.76□□□□□ -0.53
DDX11-229ENST00000545668 PHKG2P15735 406 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
DDX11-229ENST00000545668 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms