RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 K7ELQ4 463 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 CD2BP2O95400 341 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 TTC22Q5TAA0 569 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 TNPO1Q92973 898 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 KDM4CQ9H3R0 1056 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 KDRP35968 1356 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 FMN2Q9NZ56 1722 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 PTPRUQ92729 1446 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 LRRC37A3O60309 1634 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 ST18O60284 1047 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 HSP90AB1P08238 724 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 CEP85Q6P2H3 762 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 TTC21AQ8NDW8 1320 aa6.44□□□□□ -1.38
ATPAF1-212ENST00000542495 ARHGAP23Q9P227 1491 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 PTMSP20962 102 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 MRE11P49959 708 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 KRT24Q2M2I5 525 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 HSP90AB2PQ58FF8 381 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 THEMISQ8N1K5 641 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 GBP4Q96PP9 640 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 USP26Q9BXU7 913 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 ZMYND15Q9H091 742 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 MSH6P52701 1360 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 SLIT1O75093 1534 aa6.43□□□□□ -1.38
ATPAF1-212ENST00000542495 USP54Q70EL1 1684 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 LTKP29376 864 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 RABEP1Q15276 862 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 SKOR2Q2VWA4 1001 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 MCM10Q7L590 875 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 GAS2L2Q8NHY3 880 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 OSBPL3Q9H4L5 887 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 ANO8Q9HCE9 1232 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 MAP3K19Q56UN5 1328 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 SBNO1A3KN83 1393 aa6.42□□□□□ -1.38
ATPAF1-212ENST00000542495 TRIM66O15016 1216 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 HTATSF1O43719 755 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 TOM1O60784 492 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 C16orf71Q8IYS4 520 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 KRI1Q8N9T8 703 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 MEIS3Q99687 375 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 RRAGDQ9NQL2 400 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 IGSF1Q8N6C5 1336 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 FLT4P35916 1363 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 N4BP2Q86UW6 1770 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 TUBGCP6Q96RT7 1819 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 MARF1Q9Y4F3 1742 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 PIK3C2AO00443 1686 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 DIP2AQ14689 1571 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 CYP2E1P05181 493 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 SDSP20132 328 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 CCT4P50991 539 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 PDE4DQ08499 809 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 MTHFSDQ2M296 383 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 OTUD7AQ8TE49 926 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 GZF1Q9H116 711 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 PODXL2Q9NZ53 605 aa6.41□□□□□ -1.38
ATPAF1-212ENST00000542495 XRN1Q8IZH2 1706 aaKnown RBP6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 FAM208AQ9UK61 1670 aaKnown RBP6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 NWD1Q149M9 1564 aa6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 IBTKQ9P2D0 1353 aaPredicted RBP6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 SOS1Q07889 1333 aaPredicted RBP6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 PANK2Q9BZ23 570 aa6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 GRPEL1Q9HAV7 217 aa6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 TBX22Q9Y458 520 aa6.4□□□□□ -1.38
ATPAF1-212ENST00000542495 ANKARQ7Z5J8 1434 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 FOXO3O43524 673 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 HMMRO75330 724 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 SSFA2P28290 1259 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 G2E3Q7L622 706 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 IL17RAQ96F46 866 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 COLQQ9Y215 455 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 SMARCA5O60264 1052 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 PIP4K2BP78356 416 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 GAS2L3Q86XJ1 694 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 EYA1Q99502 592 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 BMP2KQ9NSY1 1161 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 BABAM1Q9NWV8 329 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 TSPYL4Q9UJ04 414 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 CACNA1FO60840 1977 aa6.39□□□□□ -1.39
ATPAF1-212ENST00000542495 PXDNLA1KZ92 1463 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 RGPD8O14715 1765 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 NPHP4O75161 1426 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 ERC2O15083 957 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 REC8O95072 547 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 GNAI2P04899 355 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 HSP90AA1P07900 732 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 HSPA1LP34931 641 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 CLCN1P35523 988 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 PDE1AP54750 535 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 NUCB2P80303 420 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 KLHL40Q2TBA0 621 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 PPP1R15BQ5SWA1 713 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 CASC1Q6TDU7 716 aa6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 CWC22Q9HCG8 908 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-212ENST00000542495 MIS18AQ9NYP9 233 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms