RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
GTF2H3-209ENST00000542279 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
GTF2H3-209ENST00000542279 OSBPL3Q9H4L5 887 aa6.84□□□□□ -1.31
GTF2H3-209ENST00000542279 AVENQ9NQS1 362 aaPredicted RBP6.84□□□□□ -1.31
GTF2H3-209ENST00000542279 TPSG1Q9NRR2 321 aa6.84□□□□□ -1.31
GTF2H3-209ENST00000542279 SCTRP47872 440 aa6.83□□□□□ -1.32
GTF2H3-209ENST00000542279 TBC1D9Q6ZT07 1266 aa6.83□□□□□ -1.32
GTF2H3-209ENST00000542279 CRISPLD1Q9H336 500 aa6.83□□□□□ -1.32
GTF2H3-209ENST00000542279 HMX1Q9NP08 348 aaPredicted RBP6.83□□□□□ -1.32
GTF2H3-209ENST00000542279 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
GTF2H3-209ENST00000542279 ATXN7O15265 892 aaPredicted RBP6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 IL2RAP01589 272 aa6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 RFC5P40937 340 aa6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 AIDAQ96BJ3 306 aa6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 XAGE2Q96GT9 111 aa6.82□□□□□ -1.32
GTF2H3-209ENST00000542279 ARID3CA6NKF2 412 aa6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 LRP8Q14114 963 aa6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 FOXD4L6Q3SYB3 417 aaPredicted RBP6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 ARSJQ5FYB0 599 aaPredicted RBP6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 FBXO31Q5XUX0 539 aaPredicted RBP6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 FOXD4L3Q6VB84 417 aaPredicted RBP6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 GJA3Q9Y6H8 435 aa6.81□□□□□ -1.32
GTF2H3-209ENST00000542279 COBLO75128 1261 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 FBXO45P0C2W1 286 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 C1orf216Q8TAB5 229 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 ARID3AQ99856 593 aa6.8□□□□□ -1.32
GTF2H3-209ENST00000542279 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
GTF2H3-209ENST00000542279 POM121Q96HA1 1249 aa6.79□□□□□ -1.32
GTF2H3-209ENST00000542279 MAPTP10636 758 aaKnown RBP6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 TXKP42681 527 aa6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 PCBP4P57723 403 aaKnown RBP6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 TMEM259Q4ZIN3 620 aa6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 PPARGC1BQ86YN6 1023 aaKnown RBP6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 C1orf115Q9H7X2 142 aa6.78□□□□□ -1.32
GTF2H3-209ENST00000542279 A6NJR5 290 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 APBB1O00213 710 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 PAX4O43316 350 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 HYAL3O43820 417 aaPredicted RBP6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 RAD21O60216 631 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 CD33P20138 364 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 FCHSD1Q86WN1 690 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 SNRKQ9NRH2 765 aa6.77□□□□□ -1.33
GTF2H3-209ENST00000542279 ELOA3CA0A087WX78 387 aaPredicted RBP6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 DCDC2BA2VCK2 349 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 ELOA3DA6NLF2 546 aaPredicted RBP6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 C9orf172C9J069 976 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 PLA2G4AP47712 749 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 TNP2Q05952 138 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 USP4Q13107 963 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 NR1H3Q13133 447 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 TLR1Q15399 786 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 ELOA3BQ3SY89 546 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 PROSER2Q86WR7 435 aaPredicted RBP6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 BANK1Q8NDB2 785 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 ELOA3Q8NG57 546 aa6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 FHDC1Q9C0D6 1143 aaPredicted RBP6.76□□□□□ -1.33
GTF2H3-209ENST00000542279 TATP17735 454 aaPredicted RBP6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 NBPF1Q3BBV0 1214 aa6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 NIFKQ9BYG3 293 aaKnown RBP6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 MARK1Q9P0L2 795 aa6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
GTF2H3-209ENST00000542279 A0A1W2PNR3 127 aa6.74□□□□□ -1.33
GTF2H3-209ENST00000542279 MTMR14Q8NCE2 650 aa6.74□□□□□ -1.33
GTF2H3-209ENST00000542279 SIRT1Q96EB6 747 aa6.74□□□□□ -1.33
GTF2H3-209ENST00000542279 TRIM34Q9BYJ4 488 aa6.74□□□□□ -1.33
GTF2H3-209ENST00000542279 COG6Q9Y2V7 657 aa6.74□□□□□ -1.33
GTF2H3-209ENST00000542279 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
GTF2H3-209ENST00000542279 TRAPPC3LQ5T215 181 aa6.73□□□□□ -1.33
GTF2H3-209ENST00000542279 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 NEUROD1Q13562 356 aa6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 GRIK4Q16099 956 aa6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 NEUROD4Q9HD90 331 aa6.72□□□□□ -1.33
GTF2H3-209ENST00000542279 M0R082 166 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 ELNP15502 786 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 LAMC2Q13753 1193 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 BICDL1Q6ZP65 573 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 CCDC82Q8N4S0 544 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 ZNF417Q8TAU3 575 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 ZNF587Q96SQ5 575 aaPredicted RBP6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 GDPD2Q9HCC8 539 aa6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 DNAAF2Q9NVR5 837 aaKnown RBP6.71□□□□□ -1.34
GTF2H3-209ENST00000542279 SYT9Q86SS6 491 aa6.7□□□□□ -1.34
GTF2H3-209ENST00000542279 CDCA7Q9BWT1 371 aaPredicted RBP6.7□□□□□ -1.34
GTF2H3-209ENST00000542279 ZNF777Q9ULD5 760 aaPredicted RBP6.7□□□□□ -1.34
GTF2H3-209ENST00000542279 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
GTF2H3-209ENST00000542279 ABL2P42684 1182 aa6.69□□□□□ -1.34
GTF2H3-209ENST00000542279 MCTP1Q6DN14 999 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms