RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 ERC2O15083 957 aa14.58□□□□□ -0.07
KDM3A-216ENST00000542128 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.07
KDM3A-216ENST00000542128 NEMFO60524 1076 aa14.58□□□□□ -0.08
KDM3A-216ENST00000542128 MPHOSPH8Q99549 860 aa14.58□□□□□ -0.08
KDM3A-216ENST00000542128 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.08
KDM3A-216ENST00000542128 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
KDM3A-216ENST00000542128 CCDC171Q6TFL3 1326 aa14.58□□□□□ -0.08
KDM3A-216ENST00000542128 TSR2Q969E8 191 aaKnown RBP14.57□□□□□ -0.08
KDM3A-216ENST00000542128 KRT85P78386 507 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
KDM3A-216ENST00000542128 AMOTQ4VCS5 1084 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 PTGS1P23219 599 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 NF2P35240 595 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
KDM3A-216ENST00000542128 DHX8Q14562 1220 aaKnown RBP14.57□□□□□ -0.08
KDM3A-216ENST00000542128 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
KDM3A-216ENST00000542128 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
KDM3A-216ENST00000542128 KINO60870 393 aaKnown RBP14.56□□□□□ -0.08
KDM3A-216ENST00000542128 FCHSD2O94868 740 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 MAP2K2P36507 400 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 RARSP54136 660 aaKnown RBP14.56□□□□□ -0.08
KDM3A-216ENST00000542128 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 ANKRD24Q8TF21 1146 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 CCDC85AQ96PX6 553 aaPredicted RBP14.56□□□□□ -0.08
KDM3A-216ENST00000542128 MIS18AQ9NYP9 233 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
KDM3A-216ENST00000542128 DDB1Q16531 1140 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 TBC1D9Q6ZT07 1266 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 ATP10AO60312 1499 aa14.56□□□□□ -0.08
KDM3A-216ENST00000542128 WASHC4Q2M389 1173 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
KDM3A-216ENST00000542128 GOLIM4O00461 696 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 KDM4AO75164 1064 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 SFPQP23246 707 aaKnown RBP eCLIP14.55□□□□□ -0.08
KDM3A-216ENST00000542128 ZSCAN26Q16670 478 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 ARHGAP29Q52LW3 1261 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 CNPY4Q8N129 248 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
KDM3A-216ENST00000542128 GNAI3P08754 354 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 TICAM2Q86XR7 235 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 ACSBG1Q96GR2 724 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 ZNF652Q9Y2D9 606 aa14.55□□□□□ -0.08
KDM3A-216ENST00000542128 BMP2KLQ5H9B9 411 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 JAKMIP3Q5VZ66 844 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 ERO1AQ96HE7 468 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 ITSN2Q9NZM3 1697 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
KDM3A-216ENST00000542128 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 GBP6Q6ZN66 633 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 MCM10Q7L590 875 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
KDM3A-216ENST00000542128 CASQ1P31415 396 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 TERF2Q15554 542 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 NEK11Q8NG66 645 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 LRRCC1Q9C099 1032 aa14.54□□□□□ -0.08
KDM3A-216ENST00000542128 ELF2Q15723 593 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 THUMPD2Q9BTF0 503 aaKnown RBP14.53□□□□□ -0.08
KDM3A-216ENST00000542128 SKILP12757 684 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 PDCP20941 246 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 DCTN1Q14203 1278 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 PPM1EQ8WY54 764 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 LMBRD1Q9NUN5 540 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 SLAIN2Q9P270 581 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 PLEKHH1Q9ULM0 1364 aa14.53□□□□□ -0.08
KDM3A-216ENST00000542128 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.08
KDM3A-216ENST00000542128 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 CLASRPQ8N2M8 674 aaKnown RBP14.52□□□□□ -0.08
KDM3A-216ENST00000542128 GBP3Q9H0R5 595 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 RBM28Q9NW13 759 aaKnown RBP14.52□□□□□ -0.08
KDM3A-216ENST00000542128 DUOX2Q9NRD8 1548 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 SAMD9Q5K651 1589 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 MX1P20591 662 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 FBLN1P23142 703 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 TRDNQ13061 729 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 CCDC34Q96HJ3 373 aa14.52□□□□□ -0.08
KDM3A-216ENST00000542128 LOC102724159A0A0B4J2E5 919 aa14.52□□□□□ -0.09
KDM3A-216ENST00000542128 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.09
KDM3A-216ENST00000542128 PWP2Q15269 919 aaKnown RBP14.52□□□□□ -0.09
KDM3A-216ENST00000542128 CCDC57Q2TAC2 916 aa14.52□□□□□ -0.09
KDM3A-216ENST00000542128 BCCIPQ9P287 314 aaKnown RBP eCLIP14.52□□□□□ -0.09
KDM3A-216ENST00000542128 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
KDM3A-216ENST00000542128 RUFY2Q8WXA3 655 aa14.52□□□□□ -0.09
KDM3A-216ENST00000542128 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.09
KDM3A-216ENST00000542128 HNRNPH2P55795 449 aaKnown RBP14.51□□□□□ -0.09
KDM3A-216ENST00000542128 MCM6Q14566 821 aa14.51□□□□□ -0.09
KDM3A-216ENST00000542128 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
KDM3A-216ENST00000542128 SRCIN1Q9C0H9 1055 aa14.51□□□□□ -0.09
KDM3A-216ENST00000542128 UBE2HP62256 183 aa14.51□□□□□ -0.09
KDM3A-216ENST00000542128 TMEM63CQ9P1W3 806 aa14.51□□□□□ -0.09
KDM3A-216ENST00000542128 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
KDM3A-216ENST00000542128 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
KDM3A-216ENST00000542128 ZNF165P49910 485 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 LRCH2Q5VUJ6 765 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 ICE2Q659A1 982 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms