RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PUS7Q96PZ0 661 aaKnown RBP19.16■□□□□ 0.66
VARS2-212ENST00000542001 GPTP24298 496 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 HAND2P61296 217 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 KLHL40Q2TBA0 621 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 USP19O94966 1318 aa19.16■□□□□ 0.66
VARS2-212ENST00000542001 GJB2P29033 226 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 CPLX2Q6PUV4 134 aaKnown RBP19.15■□□□□ 0.66
VARS2-212ENST00000542001 KRT28Q7Z3Y7 464 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 DDX17Q92841 729 aaKnown RBP19.15■□□□□ 0.66
VARS2-212ENST00000542001 SNX21Q969T3 373 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 LIMCH1Q9UPQ0 1083 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 FAM173BQ6P4H8 233 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 VPS37DQ86XT2 251 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 KCNH5Q8NCM2 988 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
VARS2-212ENST00000542001 POGZQ7Z3K3 1410 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 PDCP20941 246 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 TPM4P67936 248 aa19.15■□□□□ 0.66
VARS2-212ENST00000542001 ORAI2Q96SN7 254 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 RBM25P49756 843 aaKnown RBP19.14■□□□□ 0.65
VARS2-212ENST00000542001 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 RAD21O60216 631 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 IDH1O75874 414 aaKnown RBP19.14■□□□□ 0.65
VARS2-212ENST00000542001 TRIM29Q14134 588 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 TTC39AQ5SRH9 613 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
VARS2-212ENST00000542001 AKAP17AQ02040 695 aaKnown RBP19.13■□□□□ 0.65
VARS2-212ENST00000542001 HOMER1Q86YM7 354 aa19.13■□□□□ 0.65
VARS2-212ENST00000542001 GOLIM4O00461 696 aa19.13■□□□□ 0.65
VARS2-212ENST00000542001 KINO60870 393 aaKnown RBP19.13■□□□□ 0.65
VARS2-212ENST00000542001 CHMLP26374 656 aa19.13■□□□□ 0.65
VARS2-212ENST00000542001 HOXC9P31274 260 aa19.13■□□□□ 0.65
VARS2-212ENST00000542001 LARP1Q6PKG0 1096 aaKnown RBP19.13■□□□□ 0.65
VARS2-212ENST00000542001 METP08581 1390 aa19.13■□□□□ 0.65
VARS2-212ENST00000542001 STX6O43752 255 aa19.12■□□□□ 0.65
VARS2-212ENST00000542001 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
VARS2-212ENST00000542001 STK38Q15208 465 aa19.12■□□□□ 0.65
VARS2-212ENST00000542001 UQCRHLA0A096LP55 91 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 UQCRHP07919 91 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 CDK11BP21127 795 aaKnown RBP19.11■□□□□ 0.65
VARS2-212ENST00000542001 CHST3Q7LGC8 479 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 CCDC192P0DO97 292 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 USP48Q86UV5 1035 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 MYO5CQ9NQX4 1742 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 PALD1Q9ULE6 856 aa19.11■□□□□ 0.65
VARS2-212ENST00000542001 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 HSP90AB3PQ58FF7 597 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 NUP62CLQ9H1M0 184 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 GAS2L3Q86XJ1 694 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 HIP1O00291 1037 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 DNM1Q05193 864 aaKnown RBP19.1■□□□□ 0.65
VARS2-212ENST00000542001 SMC2O95347 1197 aa19.1■□□□□ 0.65
VARS2-212ENST00000542001 CCDC158Q5M9N0 1113 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 EDC3Q96F86 508 aaKnown RBP19.09■□□□□ 0.65
VARS2-212ENST00000542001 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 FLT4P35916 1363 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 AK2P54819 239 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 IL17REQ8NFR9 667 aa19.09■□□□□ 0.65
VARS2-212ENST00000542001 RBM8AQ9Y5S9 174 aaKnown RBP19.09■□□□□ 0.65
VARS2-212ENST00000542001 NUTM2BA6NNL0 878 aaPredicted RBP19.08■□□□□ 0.65
VARS2-212ENST00000542001 NUTM2EB1AL46 878 aaPredicted RBP19.08■□□□□ 0.65
VARS2-212ENST00000542001 NUTM2AQ8IVF1 878 aaPredicted RBP19.08■□□□□ 0.65
VARS2-212ENST00000542001 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.65
VARS2-212ENST00000542001 TPD52L1Q16890 204 aaPredicted RBP19.08■□□□□ 0.64
VARS2-212ENST00000542001 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.64
VARS2-212ENST00000542001 ISM2Q6H9L7 571 aa19.08■□□□□ 0.64
VARS2-212ENST00000542001 GCP02774 474 aa19.08■□□□□ 0.64
VARS2-212ENST00000542001 FAM177A1Q8N128 213 aaPredicted RBP19.07■□□□□ 0.64
VARS2-212ENST00000542001 BICDL1Q6ZP65 573 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 ANKRD13DQ6ZTN6 518 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 CCDC144CPQ8IYA2 1237 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 PDILTQ8N807 584 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 KDM5AP29375 1690 aaKnown RBP19.07■□□□□ 0.64
VARS2-212ENST00000542001 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 IFIT1P09914 478 aaKnown RBP19.07■□□□□ 0.64
VARS2-212ENST00000542001 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
VARS2-212ENST00000542001 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
VARS2-212ENST00000542001 TTLL5Q6EMB2 1281 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 BRF1Q92994 677 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 TTC12Q9H892 705 aaPredicted RBP19.06■□□□□ 0.64
VARS2-212ENST00000542001 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 LMBR1LQ6UX01 489 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 NUP133Q8WUM0 1156 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 RBSNQ9H1K0 784 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 GRM8O00222 908 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
VARS2-212ENST00000542001 HYPKQ9NX55 129 aa19.05■□□□□ 0.64
VARS2-212ENST00000542001 NMIQ13287 307 aaPredicted RBP19.05■□□□□ 0.64
VARS2-212ENST00000542001 BIN1O00499 593 aa19.05■□□□□ 0.64
VARS2-212ENST00000542001 ANTXR1Q9H6X2 564 aa19.05■□□□□ 0.64
VARS2-212ENST00000542001 TRPM1Q7Z4N2 1603 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 USP44Q9H0E7 712 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 TRPM2O94759 1503 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms