RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
ITM2C-208ENST00000541852 TJP1Q07157 1748 aa20.07■□□□□ 0.8
ITM2C-208ENST00000541852 KIF3CO14782 793 aa20.06■□□□□ 0.8
ITM2C-208ENST00000541852 KIAA1551Q9HCM1 1747 aa20.06■□□□□ 0.8
ITM2C-208ENST00000541852 TOMM70O94826 608 aa20.05■□□□□ 0.8
ITM2C-208ENST00000541852 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
ITM2C-208ENST00000541852 ZNF790Q6PG37 636 aa20.04■□□□□ 0.8
ITM2C-208ENST00000541852 ZBTB1Q9Y2K1 713 aa20.04■□□□□ 0.8
ITM2C-208ENST00000541852 COL15A1P39059 1388 aa20.04■□□□□ 0.8
ITM2C-208ENST00000541852 NFIXQ14938 502 aa20.03■□□□□ 0.8
ITM2C-208ENST00000541852 C9orf131Q5VYM1 1079 aa20.03■□□□□ 0.8
ITM2C-208ENST00000541852 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
ITM2C-208ENST00000541852 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
ITM2C-208ENST00000541852 PDZRN3Q9UPQ7 1066 aa20.03■□□□□ 0.8
ITM2C-208ENST00000541852 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
ITM2C-208ENST00000541852 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
ITM2C-208ENST00000541852 ARFGEF1Q9Y6D6 1849 aa20.02■□□□□ 0.8
ITM2C-208ENST00000541852 CANXP27824 592 aaKnown RBP20.02■□□□□ 0.8
ITM2C-208ENST00000541852 EIF5P55010 431 aaKnown RBP20.02■□□□□ 0.8
ITM2C-208ENST00000541852 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.79
ITM2C-208ENST00000541852 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.79
ITM2C-208ENST00000541852 SERPINB2P05120 415 aa20.01■□□□□ 0.79
ITM2C-208ENST00000541852 FMNL2Q96PY5 1086 aa20.01■□□□□ 0.79
ITM2C-208ENST00000541852 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
ITM2C-208ENST00000541852 CHRNA5P30532 468 aa20■□□□□ 0.79
ITM2C-208ENST00000541852 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
ITM2C-208ENST00000541852 H0YIN7 160 aa19.99■□□□□ 0.79
ITM2C-208ENST00000541852 IL6STP40189 918 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-208ENST00000541852 APLP1P51693 650 aa19.99■□□□□ 0.79
ITM2C-208ENST00000541852 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-208ENST00000541852 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-208ENST00000541852 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-208ENST00000541852 TTLL6Q8N841 843 aa19.98■□□□□ 0.79
ITM2C-208ENST00000541852 BCL2L12Q9HB09 334 aa19.98■□□□□ 0.79
ITM2C-208ENST00000541852 ZC3H4Q9UPT8 1303 aaKnown RBP19.98■□□□□ 0.79
ITM2C-208ENST00000541852 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
ITM2C-208ENST00000541852 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
ITM2C-208ENST00000541852 RTF1Q92541 710 aaKnown RBP19.97■□□□□ 0.79
ITM2C-208ENST00000541852 RNF181Q9P0P0 153 aa19.97■□□□□ 0.79
ITM2C-208ENST00000541852 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
ITM2C-208ENST00000541852 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
ITM2C-208ENST00000541852 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
ITM2C-208ENST00000541852 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
ITM2C-208ENST00000541852 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
ITM2C-208ENST00000541852 PDE6BP35913 854 aa19.95■□□□□ 0.78
ITM2C-208ENST00000541852 RSPH6AQ9H0K4 717 aa19.95■□□□□ 0.78
ITM2C-208ENST00000541852 NMRK2Q9NPI5 230 aa19.95■□□□□ 0.78
ITM2C-208ENST00000541852 FSTL1Q12841 308 aa19.94■□□□□ 0.78
ITM2C-208ENST00000541852 C2CD5Q86YS7 1000 aa19.94■□□□□ 0.78
ITM2C-208ENST00000541852 PHACTR3Q96KR7 559 aa19.94■□□□□ 0.78
ITM2C-208ENST00000541852 BRIP1Q9BX63 1249 aa19.94■□□□□ 0.78
ITM2C-208ENST00000541852 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
ITM2C-208ENST00000541852 LMNB1P20700 586 aa19.93■□□□□ 0.78
ITM2C-208ENST00000541852 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
ITM2C-208ENST00000541852 SETDB2Q96T68 719 aa19.93■□□□□ 0.78
ITM2C-208ENST00000541852 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
ITM2C-208ENST00000541852 AFDNP55196 1824 aaKnown RBP19.92■□□□□ 0.78
ITM2C-208ENST00000541852 BICDL1Q6ZP65 573 aa19.92■□□□□ 0.78
ITM2C-208ENST00000541852 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
ITM2C-208ENST00000541852 A1BGP04217 495 aa19.91■□□□□ 0.78
ITM2C-208ENST00000541852 NEFMP07197 916 aa19.91■□□□□ 0.78
ITM2C-208ENST00000541852 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
ITM2C-208ENST00000541852 TBC1D9BQ66K14 1250 aa19.91■□□□□ 0.78
ITM2C-208ENST00000541852 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
ITM2C-208ENST00000541852 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
ITM2C-208ENST00000541852 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
ITM2C-208ENST00000541852 CARMIL3Q8ND23 1372 aa19.9■□□□□ 0.78
ITM2C-208ENST00000541852 SBF1O95248 1867 aa19.9■□□□□ 0.78
ITM2C-208ENST00000541852 RGL2O15211 777 aa19.89■□□□□ 0.77
ITM2C-208ENST00000541852 RRAGCQ9HB90 399 aa19.89■□□□□ 0.77
ITM2C-208ENST00000541852 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
ITM2C-208ENST00000541852 NPHP1O15259 732 aa19.88■□□□□ 0.77
ITM2C-208ENST00000541852 ZNF622Q969S3 477 aaKnown RBP eCLIP19.88■□□□□ 0.77
ITM2C-208ENST00000541852 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
ITM2C-208ENST00000541852 GLTPD2A6NH11 291 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 VEGFAP15692 232 aaPredicted RBP19.87■□□□□ 0.77
ITM2C-208ENST00000541852 ST5P78524 1137 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 DPY19L2Q6NUT2 758 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 DZIP3Q86Y13 1208 aaKnown RBP19.87■□□□□ 0.77
ITM2C-208ENST00000541852 CNKSR1Q969H4 720 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
ITM2C-208ENST00000541852 CAMTA2O94983 1202 aa19.86■□□□□ 0.77
ITM2C-208ENST00000541852 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
ITM2C-208ENST00000541852 PRR5LQ6MZQ0 368 aa19.86■□□□□ 0.77
ITM2C-208ENST00000541852 DNAJC5GQ8N7S2 189 aa19.86■□□□□ 0.77
ITM2C-208ENST00000541852 CNBD1Q8NA66 436 aa19.86■□□□□ 0.77
ITM2C-208ENST00000541852 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
ITM2C-208ENST00000541852 KCNQ3O43525 872 aa19.85■□□□□ 0.77
ITM2C-208ENST00000541852 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
ITM2C-208ENST00000541852 SMC1BQ8NDV3 1235 aa19.85■□□□□ 0.77
ITM2C-208ENST00000541852 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
ITM2C-208ENST00000541852 RASSF7Q02833 373 aa19.84■□□□□ 0.77
ITM2C-208ENST00000541852 STYK1Q6J9G0 422 aa19.84■□□□□ 0.77
ITM2C-208ENST00000541852 MCM10Q7L590 875 aa19.84■□□□□ 0.77
ITM2C-208ENST00000541852 PNISRQ8TF01 805 aaKnown RBP19.84■□□□□ 0.77
ITM2C-208ENST00000541852 TPTE2Q6XPS3 522 aa19.83■□□□□ 0.77
ITM2C-208ENST00000541852 MASTLQ96GX5 879 aa19.82■□□□□ 0.76
ITM2C-208ENST00000541852 NFKBIEO00221 500 aa19.81■□□□□ 0.76
ITM2C-208ENST00000541852 C21orf2O43822 256 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms