RNA–Protein interactions for RNA: ENST00000541633.5

PPFIBP1-213, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-213ENST00000541633 QSER1Q2KHR3 1735 aa27.38■■□□□ 1.97
PPFIBP1-213ENST00000541633 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
PPFIBP1-213ENST00000541633 ZNF827Q17R98 1081 aa27.37■■□□□ 1.97
PPFIBP1-213ENST00000541633 UBR3Q6ZT12 1888 aa27.37■■□□□ 1.97
PPFIBP1-213ENST00000541633 CCDC87Q9NVE4 849 aa27.37■■□□□ 1.97
PPFIBP1-213ENST00000541633 HOXB7P09629 217 aa27.36■■□□□ 1.97
PPFIBP1-213ENST00000541633 TUBGCP6Q96RT7 1819 aa27.36■■□□□ 1.97
PPFIBP1-213ENST00000541633 ZBED9Q6R2W3 1325 aa27.36■■□□□ 1.97
PPFIBP1-213ENST00000541633 GNPATO15228 680 aa27.35■■□□□ 1.97
PPFIBP1-213ENST00000541633 SOS1Q07889 1333 aaPredicted RBP27.35■■□□□ 1.97
PPFIBP1-213ENST00000541633 PRAMEF22A3QJZ6 481 aa27.34■■□□□ 1.97
PPFIBP1-213ENST00000541633 SPINK5Q9NQ38 1064 aaPredicted RBP27.34■■□□□ 1.97
PPFIBP1-213ENST00000541633 USP16Q9Y5T5 823 aa27.34■■□□□ 1.97
PPFIBP1-213ENST00000541633 DUSP27Q5VZP5 1158 aa27.33■■□□□ 1.97
PPFIBP1-213ENST00000541633 FLAD1Q8NFF5 587 aa27.33■■□□□ 1.97
PPFIBP1-213ENST00000541633 CHMP4AQ9BY43 222 aa27.33■■□□□ 1.97
PPFIBP1-213ENST00000541633 RTCBQ9Y3I0 505 aaKnown RBP27.33■■□□□ 1.97
PPFIBP1-213ENST00000541633 KRT24Q2M2I5 525 aa27.32■■□□□ 1.96
PPFIBP1-213ENST00000541633 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
PPFIBP1-213ENST00000541633 CASZ1Q86V15 1759 aa27.32■■□□□ 1.96
PPFIBP1-213ENST00000541633 RPS6KA4O75676 772 aa27.31■■□□□ 1.96
PPFIBP1-213ENST00000541633 SSFA2P28290 1259 aa27.31■■□□□ 1.96
PPFIBP1-213ENST00000541633 SLFN5Q08AF3 891 aa27.31■■□□□ 1.96
PPFIBP1-213ENST00000541633 ADRA2BP18089 450 aa27.29■■□□□ 1.96
PPFIBP1-213ENST00000541633 NPM2Q86SE8 214 aaKnown RBP27.29■■□□□ 1.96
PPFIBP1-213ENST00000541633 C8orf58Q8NAV2 365 aa27.29■■□□□ 1.96
PPFIBP1-213ENST00000541633 ZBTB1Q9Y2K1 713 aa27.29■■□□□ 1.96
PPFIBP1-213ENST00000541633 ERBB4Q15303 1308 aa27.29■■□□□ 1.96
PPFIBP1-213ENST00000541633 PHF14O94880 888 aa27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 EIF2S2P20042 333 aaKnown RBP27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 CANXP27824 592 aaKnown RBP27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 HDGFL1Q5TGJ6 251 aa27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 CDCA7LQ96GN5 454 aa27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 PDGFDQ9GZP0 370 aaPredicted RBP27.28■■□□□ 1.96
PPFIBP1-213ENST00000541633 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
PPFIBP1-213ENST00000541633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.27■■□□□ 1.96
PPFIBP1-213ENST00000541633 ELL2O00472 640 aaPredicted RBP27.27■■□□□ 1.96
PPFIBP1-213ENST00000541633 A1BGP04217 495 aa27.27■■□□□ 1.96
PPFIBP1-213ENST00000541633 LRP5O75197 1615 aa27.27■■□□□ 1.96
PPFIBP1-213ENST00000541633 IL6STP40189 918 aaPredicted RBP27.26■■□□□ 1.95
PPFIBP1-213ENST00000541633 EXOSC9Q06265 439 aaKnown RBP27.26■■□□□ 1.95
PPFIBP1-213ENST00000541633 TWISTNBQ3B726 338 aaPredicted RBP27.26■■□□□ 1.95
PPFIBP1-213ENST00000541633 TRAPPC3LQ5T215 181 aa27.26■■□□□ 1.95
PPFIBP1-213ENST00000541633 COL15A1P39059 1388 aa27.24■■□□□ 1.95
PPFIBP1-213ENST00000541633 MSH5O43196 834 aa27.24■■□□□ 1.95
PPFIBP1-213ENST00000541633 TSPYL6Q8N831 410 aa27.24■■□□□ 1.95
PPFIBP1-213ENST00000541633 A0A087WZG4 1122 aa27.23■■□□□ 1.95
PPFIBP1-213ENST00000541633 TRMT2AQ8IZ69 625 aaKnown RBP27.23■■□□□ 1.95
PPFIBP1-213ENST00000541633 NECTIN2Q92692 538 aa27.23■■□□□ 1.95
PPFIBP1-213ENST00000541633 ZNF330Q9Y3S2 320 aaPredicted RBP27.23■■□□□ 1.95
PPFIBP1-213ENST00000541633 C4AP0C0L4 1744 aa27.23■■□□□ 1.95
PPFIBP1-213ENST00000541633 RFC4P35249 363 aa27.22■■□□□ 1.95
PPFIBP1-213ENST00000541633 EIF5P55010 431 aaKnown RBP27.22■■□□□ 1.95
PPFIBP1-213ENST00000541633 CCDC30Q5VVM6 783 aa27.22■■□□□ 1.95
PPFIBP1-213ENST00000541633 AMIGO3Q86WK7 504 aa27.22■■□□□ 1.95
PPFIBP1-213ENST00000541633 COL23A1Q86Y22 540 aaPredicted RBP27.22■■□□□ 1.95
PPFIBP1-213ENST00000541633 NBPF26B4DH59 902 aa27.21■■□□□ 1.95
PPFIBP1-213ENST00000541633 NBPF10Q6P3W6 841 aaKnown RBP27.21■■□□□ 1.95
PPFIBP1-213ENST00000541633 NBPF15Q8N660 670 aa27.21■■□□□ 1.95
PPFIBP1-213ENST00000541633 DBF4Q9UBU7 674 aaPredicted RBP27.21■■□□□ 1.95
PPFIBP1-213ENST00000541633 PIP4K2AP48426 406 aaPredicted RBP27.2■■□□□ 1.94
PPFIBP1-213ENST00000541633 ARHGEF1Q92888 912 aaKnown RBP27.2■■□□□ 1.94
PPFIBP1-213ENST00000541633 CACNA1FO60840 1977 aa27.2■■□□□ 1.94
PPFIBP1-213ENST00000541633 ZBTB7AO95365 584 aa27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 MYL6BP14649 208 aa27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 SLC16A10Q8TF71 515 aa27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 SPON1Q9HCB6 807 aa27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 DDX21Q9NR30 783 aaKnown RBP eCLIP27.19■■□□□ 1.94
PPFIBP1-213ENST00000541633 SMIM5Q71RC9 77 aa27.18■■□□□ 1.94
PPFIBP1-213ENST00000541633 STK31Q9BXU1 1019 aa27.18■■□□□ 1.94
PPFIBP1-213ENST00000541633 CHPF2Q9P2E5 772 aa27.18■■□□□ 1.94
PPFIBP1-213ENST00000541633 ZPR1O75312 459 aa27.17■■□□□ 1.94
PPFIBP1-213ENST00000541633 VAMP4O75379 141 aa27.17■■□□□ 1.94
PPFIBP1-213ENST00000541633 CT47B1P0C2W7 299 aaPredicted RBP27.16■■□□□ 1.94
PPFIBP1-213ENST00000541633 PDIA6Q15084 440 aa27.16■■□□□ 1.94
PPFIBP1-213ENST00000541633 HYPKQ9NX55 129 aa27.16■■□□□ 1.94
PPFIBP1-213ENST00000541633 ARXQ96QS3 562 aa27.15■■□□□ 1.94
PPFIBP1-213ENST00000541633 MTFR1LQ9H019 292 aa27.15■■□□□ 1.94
PPFIBP1-213ENST00000541633 USP42Q9H9J4 1324 aaKnown RBP27.15■■□□□ 1.94
PPFIBP1-213ENST00000541633 DZIP3Q86Y13 1208 aaKnown RBP27.14■■□□□ 1.94
PPFIBP1-213ENST00000541633 ZNF428Q96B54 188 aa27.14■■□□□ 1.94
PPFIBP1-213ENST00000541633 NARFQ9UHQ1 456 aa27.14■■□□□ 1.94
PPFIBP1-213ENST00000541633 SCN7AQ01118 1682 aa27.14■■□□□ 1.93
PPFIBP1-213ENST00000541633 PROSER3Q2NL68 480 aa27.13■■□□□ 1.93
PPFIBP1-213ENST00000541633 KIF6Q6ZMV9 814 aa27.13■■□□□ 1.93
PPFIBP1-213ENST00000541633 ATF5Q9Y2D1 282 aaPredicted RBP27.13■■□□□ 1.93
PPFIBP1-213ENST00000541633 BCORQ6W2J9 1755 aa27.12■■□□□ 1.93
PPFIBP1-213ENST00000541633 ANXA1P04083 346 aa27.12■■□□□ 1.93
PPFIBP1-213ENST00000541633 TBC1D2BQ9UPU7 963 aa27.12■■□□□ 1.93
PPFIBP1-213ENST00000541633 SRCAPQ6ZRS2 3230 aa27.11■■□□□ 1.93
PPFIBP1-213ENST00000541633 LRP10Q7Z4F1 713 aa27.1■■□□□ 1.93
PPFIBP1-213ENST00000541633 RGL2O15211 777 aa27.09■■□□□ 1.93
PPFIBP1-213ENST00000541633 USPL1Q5W0Q7 1092 aa27.09■■□□□ 1.93
PPFIBP1-213ENST00000541633 NLGN1Q8N2Q7 840 aa27.09■■□□□ 1.93
PPFIBP1-213ENST00000541633 SRP68Q9UHB9 627 aaKnown RBP27.09■■□□□ 1.93
PPFIBP1-213ENST00000541633 ZNF652Q9Y2D9 606 aa27.09■■□□□ 1.93
PPFIBP1-213ENST00000541633 GYS1P13807 737 aa27.08■■□□□ 1.93
PPFIBP1-213ENST00000541633 PTGER2P43116 358 aa27.08■■□□□ 1.93
PPFIBP1-213ENST00000541633 COPS6Q7L5N1 327 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms