RNA–Protein interactions for RNA: ENST00000541511.1

KDM2B-213, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 528 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-213ENST00000541511 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-213ENST00000541511 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-213ENST00000541511 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
KDM2B-213ENST00000541511 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
KDM2B-213ENST00000541511 TRAPPC3LQ5T215 181 aa17.27■□□□□ 0.36
KDM2B-213ENST00000541511 A0A087WZG4 1122 aa17.26■□□□□ 0.35
KDM2B-213ENST00000541511 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-213ENST00000541511 E9PSI1 815 aa17.26■□□□□ 0.35
KDM2B-213ENST00000541511 MSH5O43196 834 aa17.26■□□□□ 0.35
KDM2B-213ENST00000541511 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
KDM2B-213ENST00000541511 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
KDM2B-213ENST00000541511 COL5A3P25940 1745 aaPredicted RBP17.25■□□□□ 0.35
KDM2B-213ENST00000541511 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
KDM2B-213ENST00000541511 TJP1Q07157 1748 aa17.24■□□□□ 0.35
KDM2B-213ENST00000541511 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
KDM2B-213ENST00000541511 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
KDM2B-213ENST00000541511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
KDM2B-213ENST00000541511 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
KDM2B-213ENST00000541511 RFC4P35249 363 aa17.24■□□□□ 0.35
KDM2B-213ENST00000541511 PHF14O94880 888 aa17.23■□□□□ 0.35
KDM2B-213ENST00000541511 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
KDM2B-213ENST00000541511 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
KDM2B-213ENST00000541511 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
KDM2B-213ENST00000541511 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
KDM2B-213ENST00000541511 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
KDM2B-213ENST00000541511 A1BGP04217 495 aa17.22■□□□□ 0.35
KDM2B-213ENST00000541511 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
KDM2B-213ENST00000541511 PRAMEF22A3QJZ6 481 aa17.21■□□□□ 0.35
KDM2B-213ENST00000541511 ZPR1O75312 459 aa17.21■□□□□ 0.35
KDM2B-213ENST00000541511 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
KDM2B-213ENST00000541511 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
KDM2B-213ENST00000541511 ZBTB1Q9Y2K1 713 aa17.21■□□□□ 0.35
KDM2B-213ENST00000541511 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.34
KDM2B-213ENST00000541511 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
KDM2B-213ENST00000541511 EIF5P55010 431 aaKnown RBP17.2■□□□□ 0.34
KDM2B-213ENST00000541511 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
KDM2B-213ENST00000541511 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
KDM2B-213ENST00000541511 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
KDM2B-213ENST00000541511 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-213ENST00000541511 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
KDM2B-213ENST00000541511 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-213ENST00000541511 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-213ENST00000541511 ARXQ96QS3 562 aa17.19■□□□□ 0.34
KDM2B-213ENST00000541511 MTFR1LQ9H019 292 aa17.19■□□□□ 0.34
KDM2B-213ENST00000541511 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-213ENST00000541511 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
KDM2B-213ENST00000541511 KRT24Q2M2I5 525 aa17.18■□□□□ 0.34
KDM2B-213ENST00000541511 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
KDM2B-213ENST00000541511 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
KDM2B-213ENST00000541511 SPON1Q9HCB6 807 aa17.18■□□□□ 0.34
KDM2B-213ENST00000541511 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
KDM2B-213ENST00000541511 COL15A1P39059 1388 aa17.17■□□□□ 0.34
KDM2B-213ENST00000541511 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
KDM2B-213ENST00000541511 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
KDM2B-213ENST00000541511 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
KDM2B-213ENST00000541511 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
KDM2B-213ENST00000541511 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
KDM2B-213ENST00000541511 MYL6BP14649 208 aa17.16■□□□□ 0.34
KDM2B-213ENST00000541511 POLD1P28340 1107 aa17.16■□□□□ 0.34
KDM2B-213ENST00000541511 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
KDM2B-213ENST00000541511 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
KDM2B-213ENST00000541511 TUBGCP6Q96RT7 1819 aa17.16■□□□□ 0.34
KDM2B-213ENST00000541511 NBPF26B4DH59 902 aa17.15■□□□□ 0.34
KDM2B-213ENST00000541511 RGL2O15211 777 aa17.15■□□□□ 0.34
KDM2B-213ENST00000541511 NBPF10Q6P3W6 841 aaKnown RBP17.15■□□□□ 0.34
KDM2B-213ENST00000541511 KIF6Q6ZMV9 814 aa17.15■□□□□ 0.34
KDM2B-213ENST00000541511 DZIP3Q86Y13 1208 aaKnown RBP17.15■□□□□ 0.34
KDM2B-213ENST00000541511 NBPF15Q8N660 670 aa17.15■□□□□ 0.34
KDM2B-213ENST00000541511 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
KDM2B-213ENST00000541511 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
KDM2B-213ENST00000541511 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
KDM2B-213ENST00000541511 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
KDM2B-213ENST00000541511 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
KDM2B-213ENST00000541511 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
KDM2B-213ENST00000541511 USP42Q9H9J4 1324 aaKnown RBP17.14■□□□□ 0.33
KDM2B-213ENST00000541511 VAMP4O75379 141 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-213ENST00000541511 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-213ENST00000541511 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
KDM2B-213ENST00000541511 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-213ENST00000541511 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
KDM2B-213ENST00000541511 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
KDM2B-213ENST00000541511 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
KDM2B-213ENST00000541511 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
KDM2B-213ENST00000541511 GYS1P13807 737 aa17.11■□□□□ 0.33
KDM2B-213ENST00000541511 PDIA6Q15084 440 aa17.11■□□□□ 0.33
KDM2B-213ENST00000541511 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
KDM2B-213ENST00000541511 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
KDM2B-213ENST00000541511 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
KDM2B-213ENST00000541511 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
KDM2B-213ENST00000541511 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
KDM2B-213ENST00000541511 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
KDM2B-213ENST00000541511 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
KDM2B-213ENST00000541511 XAGE3Q8WTP9 111 aa17.09■□□□□ 0.33
KDM2B-213ENST00000541511 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
KDM2B-213ENST00000541511 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms