RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 SRCIN1Q9C0H9 1055 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 COL18A1P39060 1754 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 ATF3P18847 181 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
LGR5-203ENST00000540815 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
LGR5-203ENST00000540815 ABCC6O95255 1503 aa13.89□□□□□ -0.19
LGR5-203ENST00000540815 ANXA1P04083 346 aa13.89□□□□□ -0.19
LGR5-203ENST00000540815 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
LGR5-203ENST00000540815 SSH3Q8TE77 659 aa13.89□□□□□ -0.19
LGR5-203ENST00000540815 DNAAF4Q8WXU2 420 aa13.89□□□□□ -0.19
LGR5-203ENST00000540815 K7ELQ4 463 aaPredicted RBP13.88□□□□□ -0.19
LGR5-203ENST00000540815 CD2BP2O95400 341 aaKnown RBP13.88□□□□□ -0.19
LGR5-203ENST00000540815 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
LGR5-203ENST00000540815 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
LGR5-203ENST00000540815 RABEP1Q15276 862 aa13.88□□□□□ -0.19
LGR5-203ENST00000540815 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
LGR5-203ENST00000540815 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
LGR5-203ENST00000540815 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 HSPA2P54652 639 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 POLA2Q14181 598 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
LGR5-203ENST00000540815 ADCY9O60503 1353 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
LGR5-203ENST00000540815 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
LGR5-203ENST00000540815 MX1P20591 662 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 CABLES1Q8TDN4 633 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
LGR5-203ENST00000540815 RAB11FIP3O75154 756 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 REC8O95072 547 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 AOX1Q06278 1338 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 PRDM4Q9UKN5 801 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 MEGF6O75095 1541 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 ERC2O15083 957 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 TSHZ3Q63HK5 1081 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
LGR5-203ENST00000540815 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
LGR5-203ENST00000540815 MRE11P49959 708 aa13.85□□□□□ -0.19
LGR5-203ENST00000540815 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
LGR5-203ENST00000540815 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
LGR5-203ENST00000540815 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
LGR5-203ENST00000540815 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
LGR5-203ENST00000540815 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
LGR5-203ENST00000540815 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
LGR5-203ENST00000540815 ALDH1L1O75891 902 aa13.83□□□□□ -0.19
LGR5-203ENST00000540815 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.19
LGR5-203ENST00000540815 HYPKQ9NX55 129 aa13.83□□□□□ -0.19
LGR5-203ENST00000540815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.194e-7■□□□□ 11
LGR5-203ENST00000540815 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
LGR5-203ENST00000540815 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
LGR5-203ENST00000540815 KSR2Q6VAB6 950 aa13.83□□□□□ -0.2
LGR5-203ENST00000540815 PDCL3Q9H2J4 239 aa13.83□□□□□ -0.2
LGR5-203ENST00000540815 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
LGR5-203ENST00000540815 C5P01031 1676 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 SPG7Q9UQ90 795 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
LGR5-203ENST00000540815 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 PHKG2P15735 406 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 MTX1Q13505 466 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 R3HCC1Q9Y3T6 440 aaKnown RBP13.82□□□□□ -0.2
LGR5-203ENST00000540815 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
LGR5-203ENST00000540815 DDX11L8A8MPP1 907 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 MRC1P22897 1456 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 AK9Q5TCS8 1911 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
LGR5-203ENST00000540815 JARID2Q92833 1246 aaPredicted RBP13.81□□□□□ -0.2
LGR5-203ENST00000540815 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
LGR5-203ENST00000540815 CPDO75976 1380 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 CHMLP26374 656 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 PDIA6Q15084 440 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 IL1RAPL2Q9NP60 686 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 HDAC5Q9UQL6 1122 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
LGR5-203ENST00000540815 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
LGR5-203ENST00000540815 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 ST18O60284 1047 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
LGR5-203ENST00000540815 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms