RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 WWC1Q8IX03 1113 aa21.9■■□□□ 1.1
UBC-208ENST00000540700 ASAP1Q9ULH1 1129 aa21.9■■□□□ 1.1
UBC-208ENST00000540700 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
UBC-208ENST00000540700 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
UBC-208ENST00000540700 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
UBC-208ENST00000540700 ATG3Q9NT62 314 aa21.89■■□□□ 1.09
UBC-208ENST00000540700 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.09
UBC-208ENST00000540700 UBR3Q6ZT12 1888 aa21.89■■□□□ 1.09
UBC-208ENST00000540700 ZNF521Q96K83 1311 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 KCNQ3O43525 872 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 TOMM70O94826 608 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 TEFQ10587 303 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 SLC39A6Q13433 755 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 ARHGAP27Q6ZUM4 889 aa21.88■■□□□ 1.09
UBC-208ENST00000540700 DNAJC5GQ8N7S2 189 aa21.87■■□□□ 1.09
UBC-208ENST00000540700 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
UBC-208ENST00000540700 PXDNLA1KZ92 1463 aa21.87■■□□□ 1.09
UBC-208ENST00000540700 KCPQ6ZWJ8 1503 aa21.86■■□□□ 1.09
UBC-208ENST00000540700 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
UBC-208ENST00000540700 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
UBC-208ENST00000540700 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
UBC-208ENST00000540700 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
UBC-208ENST00000540700 BTBD11A6QL63 1104 aa21.83■■□□□ 1.09
UBC-208ENST00000540700 ZNF853P0CG23 659 aa21.83■■□□□ 1.09
UBC-208ENST00000540700 DPEP1P16444 411 aa21.83■■□□□ 1.09
UBC-208ENST00000540700 TGFB2P61812 414 aa21.83■■□□□ 1.09
UBC-208ENST00000540700 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.09
UBC-208ENST00000540700 CICQ96RK0 1608 aaPredicted RBP21.83■■□□□ 1.08
UBC-208ENST00000540700 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
UBC-208ENST00000540700 HTRA3P83110 453 aa21.82■■□□□ 1.08
UBC-208ENST00000540700 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
UBC-208ENST00000540700 RTCBQ9Y3I0 505 aaKnown RBP21.82■■□□□ 1.08
UBC-208ENST00000540700 CHL1O00533 1208 aa21.81■■□□□ 1.08
UBC-208ENST00000540700 ZNF790Q6PG37 636 aa21.81■■□□□ 1.08
UBC-208ENST00000540700 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
UBC-208ENST00000540700 C16orf71Q8IYS4 520 aaPredicted RBP21.8■■□□□ 1.08
UBC-208ENST00000540700 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
UBC-208ENST00000540700 C9orf131Q5VYM1 1079 aa21.79■■□□□ 1.08
UBC-208ENST00000540700 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
UBC-208ENST00000540700 CCDC87Q9NVE4 849 aa21.79■■□□□ 1.08
UBC-208ENST00000540700 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
UBC-208ENST00000540700 C10orf71Q711Q0 1435 aa21.79■■□□□ 1.08
UBC-208ENST00000540700 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
UBC-208ENST00000540700 WDR63Q8IWG1 891 aa21.78■■□□□ 1.08
UBC-208ENST00000540700 NGEFQ8N5V2 710 aa21.78■■□□□ 1.08
UBC-208ENST00000540700 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
UBC-208ENST00000540700 ZNF496Q96IT1 587 aaPredicted RBP21.78■■□□□ 1.08
UBC-208ENST00000540700 MBIPQ9NS73 344 aa21.78■■□□□ 1.08
UBC-208ENST00000540700 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
UBC-208ENST00000540700 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
UBC-208ENST00000540700 N4BP2Q86UW6 1770 aaPredicted RBP21.77■■□□□ 1.08
UBC-208ENST00000540700 RBM46Q8TBY0 533 aaKnown RBP21.77■■□□□ 1.08
UBC-208ENST00000540700 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
UBC-208ENST00000540700 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
UBC-208ENST00000540700 TJP1Q07157 1748 aa21.77■■□□□ 1.08
UBC-208ENST00000540700 IL16Q14005 1332 aa21.77■■□□□ 1.07
UBC-208ENST00000540700 PRAMEF22A3QJZ6 481 aa21.76■■□□□ 1.07
UBC-208ENST00000540700 GYS1P13807 737 aa21.76■■□□□ 1.07
UBC-208ENST00000540700 RFC4P35249 363 aa21.76■■□□□ 1.07
UBC-208ENST00000540700 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
UBC-208ENST00000540700 KRT24Q2M2I5 525 aa21.76■■□□□ 1.07
UBC-208ENST00000540700 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
UBC-208ENST00000540700 HEG1Q9ULI3 1381 aa21.75■■□□□ 1.07
UBC-208ENST00000540700 CAPN15O75808 1086 aa21.75■■□□□ 1.07
UBC-208ENST00000540700 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
UBC-208ENST00000540700 COL13A1Q5TAT6 717 aaPredicted RBP21.74■■□□□ 1.07
UBC-208ENST00000540700 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
UBC-208ENST00000540700 KIAA1551Q9HCM1 1747 aa21.74■■□□□ 1.07
UBC-208ENST00000540700 ADRA2BP18089 450 aa21.73■■□□□ 1.07
UBC-208ENST00000540700 KCNA3P22001 575 aa21.73■■□□□ 1.07
UBC-208ENST00000540700 GNAI1P63096 354 aa21.73■■□□□ 1.07
UBC-208ENST00000540700 CALD1Q05682 793 aaKnown RBP21.73■■□□□ 1.07
UBC-208ENST00000540700 KLRG1Q96E93 195 aa21.73■■□□□ 1.07
UBC-208ENST00000540700 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
UBC-208ENST00000540700 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
UBC-208ENST00000540700 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
UBC-208ENST00000540700 ZBED9Q6R2W3 1325 aa21.72■■□□□ 1.07
UBC-208ENST00000540700 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
UBC-208ENST00000540700 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
UBC-208ENST00000540700 RC3H1Q5TC82 1133 aaKnown RBP21.71■■□□□ 1.07
UBC-208ENST00000540700 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
UBC-208ENST00000540700 RNF181Q9P0P0 153 aa21.71■■□□□ 1.07
UBC-208ENST00000540700 PIM2Q9P1W9 311 aa21.71■■□□□ 1.07
UBC-208ENST00000540700 PCNTO95613 3336 aa21.7■■□□□ 1.06
UBC-208ENST00000540700 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
UBC-208ENST00000540700 SLFN5Q08AF3 891 aa21.7■■□□□ 1.06
UBC-208ENST00000540700 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
UBC-208ENST00000540700 RRAGCQ9HB90 399 aa21.7■■□□□ 1.06
UBC-208ENST00000540700 CNTNAP4Q9C0A0 1308 aa21.7■■□□□ 1.06
UBC-208ENST00000540700 COL5A3P25940 1745 aaPredicted RBP21.69■■□□□ 1.06
UBC-208ENST00000540700 FSTL1Q12841 308 aa21.69■■□□□ 1.06
UBC-208ENST00000540700 DALRD3Q5D0E6 543 aaKnown RBP21.69■■□□□ 1.06
UBC-208ENST00000540700 SRP68Q9UHB9 627 aaKnown RBP21.69■■□□□ 1.06
UBC-208ENST00000540700 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
UBC-208ENST00000540700 C4AP0C0L4 1744 aa21.69■■□□□ 1.06
UBC-208ENST00000540700 TRMT2AQ8IZ69 625 aaKnown RBP21.68■■□□□ 1.06
UBC-208ENST00000540700 VSIG10Q8N0Z9 540 aa21.68■■□□□ 1.06
UBC-208ENST00000540700 TSPYL6Q8N831 410 aa21.68■■□□□ 1.06
UBC-208ENST00000540700 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
UBC-208ENST00000540700 USP16Q9Y5T5 823 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms