RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
LDHA-218ENST00000540430 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
LDHA-218ENST00000540430 PTGER2P43116 358 aa11.57□□□□□ -0.56
LDHA-218ENST00000540430 HDAC1Q13547 482 aaPredicted RBP11.57□□□□□ -0.56
LDHA-218ENST00000540430 RLBP1P12271 317 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 ZNF445P59923 1031 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 PDLIM2Q96JY6 352 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 MTFR1LQ9H019 292 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
LDHA-218ENST00000540430 GTF2E1P29083 439 aaPredicted RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
LDHA-218ENST00000540430 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 RRS1Q15050 365 aaKnown RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
LDHA-218ENST00000540430 ZCRB1Q8TBF4 217 aaKnown RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
LDHA-218ENST00000540430 MEGF6O75095 1541 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
LDHA-218ENST00000540430 LRRC4BQ9NT99 713 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 KIF20BQ96Q89 1820 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
LDHA-218ENST00000540430 YY1P25490 414 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 R3HCC1Q9Y3T6 440 aaKnown RBP11.54□□□□□ -0.56
LDHA-218ENST00000540430 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
LDHA-218ENST00000540430 UQCRHLA0A096LP55 91 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 UQCRHP07919 91 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 NCLP19338 710 aaKnown RBP11.53□□□□□ -0.56
LDHA-218ENST00000540430 ZNF827Q17R98 1081 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 DOT1LQ8TEK3 1739 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
LDHA-218ENST00000540430 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
LDHA-218ENST00000540430 SYTL4Q96C24 671 aaPredicted RBP11.53□□□□□ -0.56
LDHA-218ENST00000540430 FLT4P35916 1363 aa11.52□□□□□ -0.56
LDHA-218ENST00000540430 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
LDHA-218ENST00000540430 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
LDHA-218ENST00000540430 ZKSCAN5Q9Y2L8 839 aa11.52□□□□□ -0.57
LDHA-218ENST00000540430 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
LDHA-218ENST00000540430 UTRNP46939 3433 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 NSD2O96028 1365 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 SASS6Q6UVJ0 657 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
LDHA-218ENST00000540430 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
LDHA-218ENST00000540430 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
LDHA-218ENST00000540430 KIF16BQ96L93 1317 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 LY75O60449 1722 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
LDHA-218ENST00000540430 DMTNQ08495 405 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 ZKSCAN2Q63HK3 967 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
LDHA-218ENST00000540430 NSD3Q9BZ95 1437 aa11.5□□□□□ -0.57
LDHA-218ENST00000540430 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
LDHA-218ENST00000540430 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
LDHA-218ENST00000540430 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
LDHA-218ENST00000540430 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
LDHA-218ENST00000540430 DDX19BQ9UMR2 479 aa11.49□□□□□ -0.57
LDHA-218ENST00000540430 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
LDHA-218ENST00000540430 BAG4O95429 457 aaKnown RBP11.49□□□□□ -0.57
LDHA-218ENST00000540430 KIF2CQ99661 725 aa11.49□□□□□ -0.57
LDHA-218ENST00000540430 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
LDHA-218ENST00000540430 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
LDHA-218ENST00000540430 FTSJ3Q8IY81 847 aaKnown RBP11.48□□□□□ -0.57
LDHA-218ENST00000540430 TFCP2L1Q9NZI6 479 aa11.48□□□□□ -0.57
LDHA-218ENST00000540430 TNNQ9UQP3 1299 aa11.48□□□□□ -0.57
LDHA-218ENST00000540430 PNPLA7Q6ZV29 1317 aa11.48□□□□□ -0.57
LDHA-218ENST00000540430 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
LDHA-218ENST00000540430 CCNL1Q9UK58 526 aaPredicted RBP11.48□□□□□ -0.57
LDHA-218ENST00000540430 ZHX1Q9UKY1 873 aaPredicted RBP11.48□□□□□ -0.57
LDHA-218ENST00000540430 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
LDHA-218ENST00000540430 KCNQ4P56696 695 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 IPO4Q8TEX9 1081 aaKnown RBP11.47□□□□□ -0.57
LDHA-218ENST00000540430 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 TUBGCP6Q96RT7 1819 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 NUCB2P80303 420 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 ZSCAN23Q3MJ62 389 aa11.47□□□□□ -0.57
LDHA-218ENST00000540430 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
LDHA-218ENST00000540430 ZSCAN20P17040 1043 aaPredicted RBP11.46□□□□□ -0.57
LDHA-218ENST00000540430 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
LDHA-218ENST00000540430 SSFA2P28290 1259 aa11.46□□□□□ -0.57
LDHA-218ENST00000540430 POLD1P28340 1107 aa11.46□□□□□ -0.57
LDHA-218ENST00000540430 NUCB1Q02818 461 aa11.46□□□□□ -0.57
LDHA-218ENST00000540430 GTPBP4Q9BZE4 634 aaKnown RBP11.46□□□□□ -0.57
LDHA-218ENST00000540430 KIF20AO95235 890 aa11.46□□□□□ -0.58
LDHA-218ENST00000540430 PKD1L3Q7Z443 1732 aa11.45□□□□□ -0.58
LDHA-218ENST00000540430 CYP27B1O15528 508 aa11.45□□□□□ -0.58
LDHA-218ENST00000540430 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms