RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
PXN-209ENST00000540221 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
PXN-209ENST00000540221 ARXQ96QS3 562 aa11.85□□□□□ -0.51
PXN-209ENST00000540221 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
PXN-209ENST00000540221 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
PXN-209ENST00000540221 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
PXN-209ENST00000540221 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
PXN-209ENST00000540221 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
PXN-209ENST00000540221 KCNQ3O43525 872 aa11.84□□□□□ -0.51
PXN-209ENST00000540221 ZPR1O75312 459 aa11.84□□□□□ -0.51
PXN-209ENST00000540221 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
PXN-209ENST00000540221 GNAI1P63096 354 aa11.84□□□□□ -0.51
PXN-209ENST00000540221 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
PXN-209ENST00000540221 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
PXN-209ENST00000540221 RGL2O15211 777 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
PXN-209ENST00000540221 HOXB7P09629 217 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
PXN-209ENST00000540221 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 ZBTB1Q9Y2K1 713 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
PXN-209ENST00000540221 TJP1Q07157 1748 aa11.83□□□□□ -0.52
PXN-209ENST00000540221 COL15A1P39059 1388 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
PXN-209ENST00000540221 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 FAM9BQ8IZU0 186 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 IL16Q14005 1332 aa11.82□□□□□ -0.52
PXN-209ENST00000540221 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
PXN-209ENST00000540221 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
PXN-209ENST00000540221 GYS1P13807 737 aa11.81□□□□□ -0.52
PXN-209ENST00000540221 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
PXN-209ENST00000540221 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 A1BGP04217 495 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
PXN-209ENST00000540221 DLG5Q8TDM6 1919 aa11.8□□□□□ -0.52
PXN-209ENST00000540221 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
PXN-209ENST00000540221 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
PXN-209ENST00000540221 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
PXN-209ENST00000540221 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
PXN-209ENST00000540221 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
PXN-209ENST00000540221 KDM3BQ7LBC6 1761 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 MMP10P09238 476 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
PXN-209ENST00000540221 TUBGCP6Q96RT7 1819 aa11.78□□□□□ -0.52
PXN-209ENST00000540221 COL24A1Q17RW2 1714 aa11.77□□□□□ -0.52
PXN-209ENST00000540221 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
PXN-209ENST00000540221 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
PXN-209ENST00000540221 MBIPQ9NS73 344 aa11.77□□□□□ -0.53
PXN-209ENST00000540221 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
PXN-209ENST00000540221 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
PXN-209ENST00000540221 TM4SF1P30408 202 aa11.76□□□□□ -0.53
PXN-209ENST00000540221 FKBP8Q14318 412 aa11.76□□□□□ -0.53
PXN-209ENST00000540221 NBPF10Q6P3W6 841 aaKnown RBP11.76□□□□□ -0.53
PXN-209ENST00000540221 NBPF15Q8N660 670 aa11.76□□□□□ -0.53
PXN-209ENST00000540221 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
PXN-209ENST00000540221 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
PXN-209ENST00000540221 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
PXN-209ENST00000540221 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
PXN-209ENST00000540221 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
PXN-209ENST00000540221 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
PXN-209ENST00000540221 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
PXN-209ENST00000540221 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
PXN-209ENST00000540221 CAMTA2O94983 1202 aa11.74□□□□□ -0.53
PXN-209ENST00000540221 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
PXN-209ENST00000540221 TGFB2P61812 414 aa11.74□□□□□ -0.53
PXN-209ENST00000540221 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
PXN-209ENST00000540221 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
PXN-209ENST00000540221 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
PXN-209ENST00000540221 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
PXN-209ENST00000540221 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 NFIXQ14938 502 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
PXN-209ENST00000540221 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 MYL6BP14649 208 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 PDIA6Q15084 440 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 MIER1Q8N108 512 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
PXN-209ENST00000540221 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
PXN-209ENST00000540221 SERPINB2P05120 415 aa11.71□□□□□ -0.53
PXN-209ENST00000540221 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.53
PXN-209ENST00000540221 DDR1Q08345 913 aa11.71□□□□□ -0.53
PXN-209ENST00000540221 HSP90AB3PQ58FF7 597 aa11.71□□□□□ -0.53
PXN-209ENST00000540221 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
PXN-209ENST00000540221 ZNF521Q96K83 1311 aa11.7□□□□□ -0.54
PXN-209ENST00000540221 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms