RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
CYB561A3-214ENST00000540139 CHMP4AQ9BY43 222 aa15.35■□□□□ 0.05
CYB561A3-214ENST00000540139 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
CYB561A3-214ENST00000540139 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
CYB561A3-214ENST00000540139 HOXB7P09629 217 aa15.34■□□□□ 0.05
CYB561A3-214ENST00000540139 SNRPA1P09661 255 aaKnown RBP15.34■□□□□ 0.05
CYB561A3-214ENST00000540139 TXNRD1Q16881 649 aa15.34■□□□□ 0.05
CYB561A3-214ENST00000540139 ZNF496Q96IT1 587 aaPredicted RBP15.34■□□□□ 0.05
CYB561A3-214ENST00000540139 SOCS7O14512 581 aa15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 KCNQ3O43525 872 aa15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 TNS1Q9HBL0 1735 aaKnown RBP15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 RGPD3A6NKT7 1758 aaPredicted RBP15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 RGPD4Q7Z3J3 1758 aa15.33■□□□□ 0.04
CYB561A3-214ENST00000540139 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 CCNL1Q9UK58 526 aaPredicted RBP15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
CYB561A3-214ENST00000540139 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
CYB561A3-214ENST00000540139 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
CYB561A3-214ENST00000540139 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-214ENST00000540139 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
CYB561A3-214ENST00000540139 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
CYB561A3-214ENST00000540139 LY75O60449 1722 aa15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 STARD3NLO95772 234 aa15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 CT47B1P0C2W7 299 aaPredicted RBP15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
CYB561A3-214ENST00000540139 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
CYB561A3-214ENST00000540139 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
CYB561A3-214ENST00000540139 DUSP27Q5VZP5 1158 aa15.29■□□□□ 0.04
CYB561A3-214ENST00000540139 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
CYB561A3-214ENST00000540139 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
CYB561A3-214ENST00000540139 ITPK1Q13572 414 aa15.28■□□□□ 0.04
CYB561A3-214ENST00000540139 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
CYB561A3-214ENST00000540139 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
CYB561A3-214ENST00000540139 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
CYB561A3-214ENST00000540139 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
CYB561A3-214ENST00000540139 ERBB4Q15303 1308 aa15.27■□□□□ 0.04
CYB561A3-214ENST00000540139 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
CYB561A3-214ENST00000540139 CYP19A1P11511 503 aaPredicted RBP15.27■□□□□ 0.04
CYB561A3-214ENST00000540139 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.04
CYB561A3-214ENST00000540139 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
CYB561A3-214ENST00000540139 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
CYB561A3-214ENST00000540139 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
CYB561A3-214ENST00000540139 VAMP4O75379 141 aa15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
CYB561A3-214ENST00000540139 RPS6KA4O75676 772 aa15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 KRT24Q2M2I5 525 aa15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 CCDC30Q5VVM6 783 aa15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
CYB561A3-214ENST00000540139 C5P01031 1676 aa15.22■□□□□ 0.03
CYB561A3-214ENST00000540139 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
CYB561A3-214ENST00000540139 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
CYB561A3-214ENST00000540139 KCNQ4P56696 695 aa15.22■□□□□ 0.03
CYB561A3-214ENST00000540139 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
CYB561A3-214ENST00000540139 SLC15A2Q16348 729 aa15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 HDGFL1Q5TGJ6 251 aa15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 STK32BQ9NY57 414 aa15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 RREB1Q92766 1687 aa15.21■□□□□ 0.03
CYB561A3-214ENST00000540139 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 A1BGP04217 495 aa15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 SSFA2P28290 1259 aa15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 AK7Q96M32 723 aa15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
CYB561A3-214ENST00000540139 A0A087WZG4 1122 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 PDIA6Q15084 440 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 HYPKQ9NX55 129 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 TJP1Q07157 1748 aa15.19■□□□□ 0.02
CYB561A3-214ENST00000540139 COL5A3P25940 1745 aaPredicted RBP15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 NBPF26B4DH59 902 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 GNPATO15228 680 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 NBPF10Q6P3W6 841 aaKnown RBP15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 NBPF15Q8N660 670 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 ZBTB1Q9Y2K1 713 aa15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
CYB561A3-214ENST00000540139 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms