RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 TEFQ10587 303 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 CFAP53Q96M91 514 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
CCND1-204ENST00000539241 N4BP2Q86UW6 1770 aaPredicted RBP18.77■□□□□ 0.6
CCND1-204ENST00000539241 STARD3NLO95772 234 aa18.75■□□□□ 0.59
CCND1-204ENST00000539241 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
CCND1-204ENST00000539241 NFIXQ14938 502 aa18.75■□□□□ 0.59
CCND1-204ENST00000539241 DALRD3Q5D0E6 543 aaKnown RBP18.75■□□□□ 0.59
CCND1-204ENST00000539241 ZNF496Q96IT1 587 aaPredicted RBP18.75■□□□□ 0.59
CCND1-204ENST00000539241 CHRNA5P30532 468 aa18.74■□□□□ 0.59
CCND1-204ENST00000539241 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
CCND1-204ENST00000539241 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
CCND1-204ENST00000539241 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
CCND1-204ENST00000539241 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
CCND1-204ENST00000539241 HEG1Q9ULI3 1381 aa18.73■□□□□ 0.59
CCND1-204ENST00000539241 KIF3CO14782 793 aa18.73■□□□□ 0.59
CCND1-204ENST00000539241 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
CCND1-204ENST00000539241 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
CCND1-204ENST00000539241 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
CCND1-204ENST00000539241 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
CCND1-204ENST00000539241 A0A087WZG4 1122 aa18.71■□□□□ 0.59
CCND1-204ENST00000539241 SERPINB2P05120 415 aa18.71■□□□□ 0.59
CCND1-204ENST00000539241 PPP2R1AP30153 589 aa18.71■□□□□ 0.59
CCND1-204ENST00000539241 C9orf131Q5VYM1 1079 aa18.71■□□□□ 0.59
CCND1-204ENST00000539241 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
CCND1-204ENST00000539241 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
CCND1-204ENST00000539241 HSPA6P17066 643 aa18.7■□□□□ 0.58
CCND1-204ENST00000539241 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCND1-204ENST00000539241 FMNL2Q96PY5 1086 aa18.7■□□□□ 0.58
CCND1-204ENST00000539241 UBR2Q8IWV8 1755 aa18.69■□□□□ 0.58
CCND1-204ENST00000539241 BRCA1P38398 1863 aaKnown RBP18.69■□□□□ 0.58
CCND1-204ENST00000539241 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
CCND1-204ENST00000539241 BICDL1Q6ZP65 573 aa18.68■□□□□ 0.58
CCND1-204ENST00000539241 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
CCND1-204ENST00000539241 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
CCND1-204ENST00000539241 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
CCND1-204ENST00000539241 KCNQ3O43525 872 aa18.67■□□□□ 0.58
CCND1-204ENST00000539241 IL6STP40189 918 aaPredicted RBP18.66■□□□□ 0.58
CCND1-204ENST00000539241 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CCND1-204ENST00000539241 NMRK2Q9NPI5 230 aa18.66■□□□□ 0.58
CCND1-204ENST00000539241 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
CCND1-204ENST00000539241 A1BGP04217 495 aa18.65■□□□□ 0.58
CCND1-204ENST00000539241 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
CCND1-204ENST00000539241 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
CCND1-204ENST00000539241 TBC1D2BQ9UPU7 963 aa18.65■□□□□ 0.58
CCND1-204ENST00000539241 CARMIL3Q8ND23 1372 aa18.65■□□□□ 0.58
CCND1-204ENST00000539241 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
CCND1-204ENST00000539241 MCM10Q7L590 875 aa18.64■□□□□ 0.57
CCND1-204ENST00000539241 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
CCND1-204ENST00000539241 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
CCND1-204ENST00000539241 H0YIN7 160 aa18.63■□□□□ 0.57
CCND1-204ENST00000539241 TOMM70O94826 608 aa18.63■□□□□ 0.57
CCND1-204ENST00000539241 TTLL6Q8N841 843 aa18.63■□□□□ 0.57
CCND1-204ENST00000539241 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
CCND1-204ENST00000539241 RASSF7Q02833 373 aa18.62■□□□□ 0.57
CCND1-204ENST00000539241 SIPA1L3O60292 1781 aaPredicted RBP18.62■□□□□ 0.57
CCND1-204ENST00000539241 DCTN1Q14203 1278 aa18.61■□□□□ 0.57
CCND1-204ENST00000539241 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
CCND1-204ENST00000539241 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
CCND1-204ENST00000539241 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
CCND1-204ENST00000539241 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
CCND1-204ENST00000539241 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
CCND1-204ENST00000539241 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
CCND1-204ENST00000539241 PRR5LQ6MZQ0 368 aa18.6■□□□□ 0.57
CCND1-204ENST00000539241 DZIP3Q86Y13 1208 aaKnown RBP18.6■□□□□ 0.57
CCND1-204ENST00000539241 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
CCND1-204ENST00000539241 PDE6BP35913 854 aa18.59■□□□□ 0.57
CCND1-204ENST00000539241 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CCND1-204ENST00000539241 C16orf71Q8IYS4 520 aaPredicted RBP18.59■□□□□ 0.57
CCND1-204ENST00000539241 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
CCND1-204ENST00000539241 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
CCND1-204ENST00000539241 PDZRN3Q9UPQ7 1066 aa18.59■□□□□ 0.57
CCND1-204ENST00000539241 SCN7AQ01118 1682 aa18.58■□□□□ 0.57
CCND1-204ENST00000539241 LMNB1P20700 586 aa18.58■□□□□ 0.56
CCND1-204ENST00000539241 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
CCND1-204ENST00000539241 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCND1-204ENST00000539241 ZC3H4Q9UPT8 1303 aaKnown RBP18.57■□□□□ 0.56
CCND1-204ENST00000539241 NPHP1O15259 732 aa18.57■□□□□ 0.56
CCND1-204ENST00000539241 APLP1P51693 650 aa18.57■□□□□ 0.56
CCND1-204ENST00000539241 RBM46Q8TBY0 533 aaKnown RBP18.57■□□□□ 0.56
CCND1-204ENST00000539241 NEFMP07197 916 aa18.56■□□□□ 0.56
CCND1-204ENST00000539241 PRELPP51888 382 aa18.56■□□□□ 0.56
CCND1-204ENST00000539241 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
CCND1-204ENST00000539241 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
CCND1-204ENST00000539241 RRAGCQ9HB90 399 aa18.56■□□□□ 0.56
CCND1-204ENST00000539241 NFKBIEO00221 500 aa18.55■□□□□ 0.56
CCND1-204ENST00000539241 ST5P78524 1137 aa18.55■□□□□ 0.56
CCND1-204ENST00000539241 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
CCND1-204ENST00000539241 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
CCND1-204ENST00000539241 DLEC1Q9Y238 1755 aa18.53■□□□□ 0.56
CCND1-204ENST00000539241 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
CCND1-204ENST00000539241 C21orf2O43822 256 aa18.53■□□□□ 0.56
CCND1-204ENST00000539241 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
CCND1-204ENST00000539241 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
CCND1-204ENST00000539241 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
CCND1-204ENST00000539241 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
CCND1-204ENST00000539241 GLTPD2A6NH11 291 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms