RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 UQCRHLA0A096LP55 91 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 UQCRHP07919 91 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 HOXC9P31274 260 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 ATP8B2P98198 1209 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-218ENST00000537641 TMEM87AQ8NBN3 555 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 ZMYND15Q9H091 742 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 PHRF1Q9P1Y6 1649 aaKnown RBP14.71□□□□□ -0.05
CPSF7-218ENST00000537641 G2E3Q7L622 706 aa14.71□□□□□ -0.05
CPSF7-218ENST00000537641 ABTB2Q8N961 1025 aa14.71□□□□□ -0.05
CPSF7-218ENST00000537641 STK31Q9BXU1 1019 aa14.71□□□□□ -0.05
CPSF7-218ENST00000537641 CRYBG1Q9Y4K1 1723 aa14.71□□□□□ -0.06
CPSF7-218ENST00000537641 PLEKHG5O94827 1062 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 SLC4A10Q6U841 1118 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 ANO2Q9NQ90 1003 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 NFAT5O94916 1531 aa14.7□□□□□ -0.06
CPSF7-218ENST00000537641 FOXO3O43524 673 aa14.69□□□□□ -0.06
CPSF7-218ENST00000537641 F6X3S4 739 aa14.69□□□□□ -0.06
CPSF7-218ENST00000537641 LETM1O95202 739 aaPredicted RBP14.69□□□□□ -0.06
CPSF7-218ENST00000537641 KIAA2012Q0VF49 1180 aa14.69□□□□□ -0.06
CPSF7-218ENST00000537641 NPHP4O75161 1426 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-218ENST00000537641 RPAP1Q9BWH6 1393 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-218ENST00000537641 HSPA4P34932 840 aa14.68□□□□□ -0.06
CPSF7-218ENST00000537641 FOXD4L5Q5VV16 416 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-218ENST00000537641 CCDC30Q5VVM6 783 aa14.68□□□□□ -0.06
CPSF7-218ENST00000537641 NUTM2GQ5VZR2 741 aa14.68□□□□□ -0.06
CPSF7-218ENST00000537641 FOXD4L4Q8WXT5 416 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-218ENST00000537641 CHAMP1Q96JM3 812 aa14.68□□□□□ -0.06
CPSF7-218ENST00000537641 TRIM6-TRIM34B2RNG4 842 aa14.67□□□□□ -0.06
CPSF7-218ENST00000537641 PTMAP06454 111 aaKnown RBP14.67□□□□□ -0.06
CPSF7-218ENST00000537641 FLIIQ13045 1269 aa14.67□□□□□ -0.06
CPSF7-218ENST00000537641 CCDC183Q5T5S1 534 aa14.67□□□□□ -0.06
CPSF7-218ENST00000537641 RILPL2Q969X0 211 aa14.67□□□□□ -0.06
CPSF7-218ENST00000537641 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
CPSF7-218ENST00000537641 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
CPSF7-218ENST00000537641 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
CPSF7-218ENST00000537641 RNF214Q8ND24 703 aa14.66□□□□□ -0.06
CPSF7-218ENST00000537641 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
CPSF7-218ENST00000537641 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
CPSF7-218ENST00000537641 RAD50Q92878 1312 aa14.65□□□□□ -0.06
CPSF7-218ENST00000537641 TSHZ3Q63HK5 1081 aa14.65□□□□□ -0.06
CPSF7-218ENST00000537641 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
CPSF7-218ENST00000537641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.65□□□□□ -0.06
CPSF7-218ENST00000537641 RBM10P98175 930 aaKnown RBP14.64□□□□□ -0.07
CPSF7-218ENST00000537641 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-218ENST00000537641 C14orf37Q86TY3 774 aa14.64□□□□□ -0.07
CPSF7-218ENST00000537641 MIS18AQ9NYP9 233 aa14.64□□□□□ -0.07
CPSF7-218ENST00000537641 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 SSH3Q8TE77 659 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 IP6K1Q92551 441 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 FAM13BQ9NYF5 915 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 TCHHQ07283 1943 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 RGPD2P0DJD1 1756 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 KIF1AQ12756 1690 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 GADD45BO75293 160 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-218ENST00000537641 PSME1Q06323 249 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 NOL8Q76FK4 1167 aaKnown RBP14.63□□□□□ -0.07
CPSF7-218ENST00000537641 PIBF1Q8WXW3 757 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 PRIMPOLQ96LW4 560 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-218ENST00000537641 ATP6V1DQ9Y5K8 247 aa14.63□□□□□ -0.07
CPSF7-218ENST00000537641 LRRFIP2Q9Y608 721 aaKnown RBP14.63□□□□□ -0.07
CPSF7-218ENST00000537641 LMO7Q8WWI1 1683 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 SLIT3O75094 1523 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 ZSCAN22P10073 491 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-218ENST00000537641 UBE2HP62256 183 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 ESCO1Q5FWF5 840 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 MYRIPQ8NFW9 859 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 TTC14Q96N46 770 aa14.62□□□□□ -0.07
CPSF7-218ENST00000537641 UPF3BQ9BZI7 483 aaKnown RBP14.62□□□□□ -0.07
CPSF7-218ENST00000537641 TRPM3Q9HCF6 1732 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-218ENST00000537641 MED1Q15648 1581 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-218ENST00000537641 SGSM2O43147 1006 aa14.61□□□□□ -0.07
CPSF7-218ENST00000537641 UBTFL1P0CB47 393 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-218ENST00000537641 HMGN5P82970 282 aaKnown RBP14.61□□□□□ -0.07
CPSF7-218ENST00000537641 POLA2Q14181 598 aa14.61□□□□□ -0.07
CPSF7-218ENST00000537641 UNC5CLQ8IV45 518 aa14.61□□□□□ -0.07
CPSF7-218ENST00000537641 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-218ENST00000537641 KDM3BQ7LBC6 1761 aa14.61□□□□□ -0.07
CPSF7-218ENST00000537641 CNTROBQ8N137 903 aa14.61□□□□□ -0.07
CPSF7-218ENST00000537641 USP42Q9H9J4 1324 aaKnown RBP14.6□□□□□ -0.07
CPSF7-218ENST00000537641 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
CPSF7-218ENST00000537641 IL17REQ8NFR9 667 aa14.6□□□□□ -0.07
CPSF7-218ENST00000537641 PI4K2BQ8TCG2 481 aa14.6□□□□□ -0.07
CPSF7-218ENST00000537641 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
CPSF7-218ENST00000537641 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
CPSF7-218ENST00000537641 F13A1P00488 732 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 GTF2F1P35269 517 aaKnown RBP eCLIP14.59□□□□□ -0.075e-10■■■■■ 57.2
CPSF7-218ENST00000537641 KIF1BPQ96EK5 621 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 LSG1Q9H089 658 aaKnown RBP14.59□□□□□ -0.07
CPSF7-218ENST00000537641 USP44Q9H0E7 712 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 GDPD2Q9HCC8 539 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 CAMTA1Q9Y6Y1 1673 aa14.59□□□□□ -0.07
CPSF7-218ENST00000537641 CEMIPQ8WUJ3 1361 aa14.58□□□□□ -0.07
CPSF7-218ENST00000537641 STX6O43752 255 aa14.58□□□□□ -0.07
CPSF7-218ENST00000537641 TPM3P06753 285 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms